Lycium barbarum (goji berry): 132643635
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Entry
132643635 CDS
T09483
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00280
Valine, leucine and isoleucine degradation
lbb00650
Butanoate metabolism
lbb01100
Metabolic pathways
lbb04146
Peroxisome
Module
lbb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
132643635
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132643635
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132643635
Enzymes [BR:
lbb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
132643635
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GFIT
Motif
Pfam:
HMGL-like
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
132643635
NCBI-ProteinID:
XP_060216095
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Position
6:complement(24055380..24061949)
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AA seq
430 aa
AA seq
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MSSLEEPLNLDRMPSLSNIDWLDRCSSGACRPIGEDVAMGDSWSDGRNCSSSNSCLEDDD
EYGRENFKWRRHGSRNGISSRRSKSLSKNYILCGTVSHSLCMTDHQPKSYSNHRSTKSNT
FKLFNGMPKHVKIVEVGPRDGLQNEKNTVPTSVKVELIQKLVSCGLPVVEVTGFVSPKWV
PQLSDAKDVMGAVKDLEGARLPVLTPNMKGFDAAIVAGAKEVAVFASASESFSKSNINCS
IEESLARYRAVTSAAKKISIPVRGYVSCAIGCPVEGAISPSKVAYVAKELHDMGCFEISL
GDTIGIATPGAVVPMLEAVMAVVPVEKLAVHFHDTYGQSLSNILVSLQMGISTIDSSVAG
LGGCPYAKGASGNVSTEDVVYMLNGLGIKTNVDLQKLLLTGEFISKYLGRPSGSKAAIAL
SGVTAEASKI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttggaagagcctcttaacctggacaggatgccaagtttgagcaacattgat
tggctagataggtgctcatctggtgcctgcaggcctataggagaagatgtggcaatgggg
gactcctggtctgatgggagaaattgcagctcatcaaacagctgccttgaagatgatgat
gaatatggaagagagaacttcaaatggagaaggcatggatcgcgtaatggcatttcaagt
cgaaggtcaaagagtcttagcaagaattatatactatgtggaactgtgtctcattcactg
tgcatgacagatcatcaacctaaatcttacagcaaccacagaagcacgaagagtaacacg
ttcaagttgttcaatggcatgccaaagcatgtgaagatagtggaagttggtccaagggat
ggattacaaaatgagaagaatactgttcctacatcagtgaaggttgaactaattcaaaaa
cttgtctcttgtgggctacctgtggttgaagtgaccggttttgtttctccaaaatgggtg
cctcagctgtcagatgccaaggatgtaatgggagcagttaaggatctggaaggtgccaga
ttgcctgtattgacacctaatatgaaaggctttgacgcagctattgtagccggggcaaaa
gaagtagcagtcttcgcatcagcttcggagtctttctcaaagtcaaacattaattgcagc
attgaggagagtcttgcccgatatcgagctgttacatctgctgccaaaaagatctcaata
ccggttcgtggatatgtatcctgtgctattgggtgcccagttgaaggagcaatttcacct
tcgaaagtggcatatgtagcaaaggaacttcatgacatgggatgctttgaaatctccctt
ggtgacacaataggaatcgctactccaggagctgttgttcctatgcttgaagcagtgatg
gctgtggttcctgttgaaaagcttgctgtgcatttccatgatacgtatggacagtctctt
tcaaacattttagtttccctccaaatgggtattagcacgattgactcctcagttgccggt
cttggaggctgtccatatgccaaaggagcttctggcaatgtttcaacagaagatgttgtc
tatatgcttaatggtctagggataaaaaccaatgtcgatttgcagaagctcctcctaacc
ggggagttcattagcaagtatctcggtcgcccatccggatccaaagcagccattgctttg
agcggagtaacagctgaggcatccaagatatag
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