Lycium barbarum (goji berry): 132643807
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Entry
132643807 CDS
T09483
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
lbb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132643807
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132643807
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132643807
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132643807
03036 Chromosome and associated proteins [BR:
lbb03036
]
132643807
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132643807
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132643807
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132643807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
132643807
NCBI-ProteinID:
XP_060216320
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Position
1:150044172..150048294
Genome browser
AA seq
499 aa
AA seq
DB search
MWKHFLSRLPKKSLKSESVDSGRGNSGLHGPNASSNLGPGRPNSAPRRTSSVVFPASVIA
GIEPLISFKDVPSSEKMNLFISKLSLCCVDFDFRDPTKNVAEKELKRATLFELLDFVSSN
PPKFSEPAILAMCKTCAVNLFRVFPPNYRSSNSRHASENDDDEPTFDPAWPHLQIVYDLL
LKFVTSSSLEAKVAKKYINHQFILKLLDLFDSEDPRERDCLKAILHRIYGKFMVHRPFIR
KSISNVFYRVVFESEKHNGIAELLEIFGSVVTGFALPLKEEHKIFLSRALIPLHKPKSLG
IYFQQLSYCVTQFIEKDPKLASTVIRGLLKYWPVTNTQKEVMFLSELEEILEVINMAEFQ
QVMVPLFWRIGCCINSFHFQVAERALFLWNNDQIVNLIAHNRHVILPVIFPAVETNAENH
WNHAVQNLSLNVRRMFSEMDDVLFMACHSHYKEEQEKINLDAVKRKEAWEQLETAASLRP
PVAGNIAVLVTPLATSITC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcattttcttagtaggcttcctaagaaatcactgaaatctgagtcagtagac
tcaggaagaggcaattcgggcttacacggcccgaatgcaagctcaaatttgggccctgga
aggcccaatagtgctccaaggaggacttcctcagttgtgttcccagcaagtgtgattgct
gggattgagcctttgatttccttcaaagatgtgcctagctctgaaaagatgaatcttttt
atcagtaagttaagcctttgctgtgtagattttgattttagggacccaactaagaatgta
gcagaaaaggaacttaaaagggccacattgtttgagcttttggattttgtatcatctaat
ccacccaaattttcagaacctgcaattcttgcaatgtgtaaaacatgtgctgttaatttg
tttcgggttttccctcctaattataggtctagtaatagccgccacgccagcgaaaatgat
gatgatgagcctacttttgatcctgcttggcctcatttgcaaattgtgtatgatctgttg
cttaagtttgtaacatcttcttctttagaagctaaggttgcaaagaaatatataaaccat
cagttcatcttgaaattacttgacttgtttgattctgaagatccaagggaaagagattgt
ttgaaagctattttgcataggatttatggcaagttcatggtccataggccttttataagg
aagagtataagcaatgtgttttaccgtgttgtgttcgagtctgagaaacataacgggatc
gctgaactgttggagatttttggaagtgtggttacgggttttgctctgccattgaaagag
gagcataagatctttttgtcaagggctttgattcctttgcacaagccaaaatccctgggg
atttactttcaacagttatcatattgtgttactcagttcatagagaaggatcccaaattg
gctagcactgtgattaggggcttgttgaagtactggcctgtcactaatacccaaaaggag
gtgatgtttttgagtgagttggaagaaattctggaagttattaacatggctgagttccaa
caagtgatggttcccttgttctggcggatcggttgctgcatcaatagtttccattttcag
gtagctgaaagggctctgttcctttggaataatgaccaaattgtgaatttgattgcacat
aaccggcatgtgattctcccggttatattcccagctgtggaaaccaatgctgagaaccac
tggaaccatgctgtgcagaacttgagtttaaatgtaaggaggatgttctccgaaatggat
gatgtgcttttcatggcttgccattcccattacaaggaagaacaagagaaaataaacttg
gatgctgtaaaacggaaggaagcatgggaacagctggagactgctgcaagtctacgtccg
cctgtagctggaaacatcgctgtcctggtaacgcctttagcaacttcaatcacttgctaa
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