Lycium barbarum (goji berry): 132644014
Help
Entry
132644014 CDS
T09483
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132644014
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
132644014
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
132644014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_long
PRORP
PPR_2
PPR_3
RNase_Zc3h12a
TPR_24
PPR_1
Mtf2
Motif
Other DBs
NCBI-GeneID:
132644014
NCBI-ProteinID:
XP_060216538
LinkDB
All DBs
Position
1:150599420..150605478
Genome browser
AA seq
556 aa
AA seq
DB search
MLVRRMGYFSPSFSKTSPFFSLLTKTPYPFNHIKPIHTKFQQTNLFSMNKKTHLCTSASF
LQEPTKTLSSRSRKKARHDAPESVLRHQLDQCSKRGDLTEALRLYEEAKLNSIPLNVHHY
NVLLYLCSGSETKEFGIEKGFKIFKEMGVNGVAPNEATFTSAARLAVAKQDPEMAFDLVK
KMKSFGLPPKLRSYGPALFGFCDNGMADEAYEVDVHMRESGVVAEEAELSALLKVSSFSK
RDDKVYEMMHRLRASVRQVGEETASVIENWFKSEFAEEVGAQNWDVGKVKEGVVKGGGGW
HGQGWLGKGKWNVVRAEMDGSGVCRSCGEKLVCIDIDPKETENFANSLAKLACEREVKAN
FVQFQEWLQRHGPFDAVVDGANVGLITQRNFNFSQLRNVVNKLRQMSGSKKLPLVILHKN
RATGGPAQHPNNKKLLESWKKAGALYATPHGSNDDWYWLYAAVSSKGLLLTNDEMRDHLF
QLLGTSFFPRWKEKHQIRMTASREDGLKLHMPPPYSNVIQESEQGCWHVPTVTGDDLEMP
RQWVCATRRKALHSLF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttcgtcgcatgggttatttttcaccttctttttctaaaacctcacctttcttt
tctcttctcactaaaaccccttatccatttaaccatatcaaacctattcacaccaaattc
caacaaaccaatcttttttccatgaacaaaaaaacccatctttgtacttctgcttctttc
cttcaagaacccacaaagacattatctagcaggtccaggaagaaagcccgccatgatgct
cctgaaagtgtgttgcgccatcaacttgaccaatgttctaaacgcggtgacttaaccgaa
gcccttcgcttatatgaagaagctaagttgaatagcattcccctcaatgttcatcattat
aatgtgttgctttatctttgttctggttctgagactaaggagtttggtattgaaaagggg
tttaagattttcaaagagatgggtgtaaatggtgttgctcctaatgaggctacttttact
agtgctgctagattggcagttgctaagcaagacccagaaatggcttttgatttagtcaag
aaaatgaagagttttggtcttccacctaagttaagatcgtatgggccagctttgtttggg
ttttgtgataatggtatggctgatgaggcttatgaagttgatgtacatatgagggaatct
ggggttgttgctgaggaagcagagctttctgcattgttaaaagttagttctttttccaaa
agggatgataaagtgtatgaaatgatgcatagattaagggcaagtgtaaggcaggtggga
gaagagacggctagtgtaatagaaaattggtttaagtctgaatttgctgaagaggttggg
gcgcagaattgggatgttgggaaagtgaaggaaggtgttgtgaaaggagggggtggttgg
catggacaagggtggttgggaaaggggaaatggaatgtggtgagagcagagatggatgga
tccggagtttgtcgttcgtgtggggaaaagcttgtgtgcattgacattgatcctaaggag
acggagaactttgctaactccttggctaaattggcttgtgaaagagaagttaaggctaat
tttgtgcaatttcaggagtggcttcagcggcatggtccatttgatgctgtggtggatggt
gcaaatgtcggcctcatcactcaacgaaattttaatttctctcagctcagaaatgttgtc
aataaattaagacagatgagtggatcgaagaaacttccattggttattttgcacaaaaat
cgtgcaacaggtggtcctgctcaacatcctaataacaagaagttgttagaaagctggaag
aaagcgggtgcactttatgccactccacatggttcaaatgatgattggtactggttatat
gctgccgtcagttccaaaggtttgcttttgacaaacgatgagatgagagaccatttgttc
caactattaggcactagcttttttcccagatggaaggaaaaacatcagatccggatgaca
gcttcaagagaagacggacttaagctccatatgccgccaccttattcaaatgttattcag
gagtcagagcagggttgttggcacgtgccaactgttactggagatgaccttgagatgcca
agacagtgggtatgtgctaccaggagaaaagcactgcactctcttttttga
DBGET
integrated database retrieval system
