Lycium barbarum (goji berry): 132644110
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Entry
132644110 CDS
T09483
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132644110
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132644110
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132644110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf_RING_Vps8
AF_0924
zf-HC5HC2H_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
132644110
NCBI-ProteinID:
XP_060216652
LinkDB
All DBs
Position
1:150945653..150951566
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AA seq
443 aa
AA seq
DB search
MLNLWVFLLMSCAYLVGYGAIGSVILIGKNHTLSFQDIEANFAPSAKSSGKCGTLYVAEP
LDACKTLTNKIEPTNNFTKEPFVLIMRGGCSFEDKVRKAQAAGFKAAIIYDNAYGDIIAM
AGTSTGVKILAVFVSKASGETLKKYAGDTDMEVWIIPSLENSAWSIMATSFISLLAMSAV
LAMCFFVRRHHIRREWPQASRVREFHGISSRLVKAMPSLIFTSVVEDNSTSITCAICLED
YSVGDKIRILPCRHKFHAMCVDAWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSLR
SVSSVSSLRSSLASSSVIHIGTGASRSPSVSRPQSLSSSHNQHSLWSYHQSPHLSISRSS
LDLQNASSQRSRAAYLISSNSLGYRSLSPLNSRYGSAYMTSPGNPSSGYIGSTSRYPNSL
HHSESITSFSPFASANSLPGGES
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttgtgggtgtttttgttgatgagttgtgcgtatttggtgggttatggagct
attggaagtgttattttgataggaaagaaccatactttgtcttttcaagatattgaagct
aattttgctccctcagcgaaaagttcaggtaaatgtgggacgttgtatgtggcagagcct
ttggatgcctgcaaaaccttgactaacaagattgaaccaactaataactttacaaaagaa
ccatttgtgctgataatgaggggtggatgtagcttcgaggataaagttagaaaagcacaa
gctgcaggttttaaagcagccattatctatgacaatgcatatggtgacataattgcaatg
gcaggaacctctactggtgtgaagatacttgcagtgttcgtttcaaaagcttctggagaa
acactcaaaaagtatgctggtgacactgatatggaagtatggataattccaagcttggaa
aactcagcttggtcaatcatggctacgtcgttcatttcattacttgctatgtcggccgtg
ctcgcaatgtgtttctttgttcgccgacatcatatacgaagagaatggccccaagcttct
cgtgttcgtgaatttcatgggattagtagccgcttggtgaaagctatgccaagtttgata
tttacatcagttgtggaggataattctacatcaataacatgtgctatatgccttgaagat
tatagtgtgggagataagattagaattcttccatgccggcacaaatttcatgctatgtgt
gttgatgcttggctgacatcatggagaaccttttgccctgtctgcaaacgggatgcaagg
accagcactggtgaaccaccagcatcagaatctacaccgttgctttcttctagtcttcga
tctgtatcttcagtgtcatctctaaggtcatcattagcatcatcatcagtgatacatata
ggcaccggagcatctcgatcgccttcagtttctcgtcctcaatctctctcgagctctcat
aaccagcattccctttggtcctaccaccagtcacctcatctttctataagccgaagttca
ctcgaccttcaaaatgcatcttcccaaagatctcgtgcggcttacttaatttcatctaac
tcactgggttatcgttctctgtcacctcttaattcaagatacgggtctgcatacatgact
agtcctggcaatccctcgtcgggctatattggatcaacaagtcgatatcctaactcactg
catcacagtgaatcaattacaagcttttcaccatttgcttcagctaactctcttcctgga
ggtgagtcatga
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