Lycium barbarum (goji berry): 132644226
Help
Entry
132644226 CDS
T09483
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132644226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132644226
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132644226
Hops complex
132644226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_EML_2
zf_RING_Vps8_fungal
zf-C3HC4_2
TPR_ELP1
ANAPC4_WD40
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
132644226
NCBI-ProteinID:
XP_060216788
LinkDB
All DBs
Position
1:complement(151147365..151153513)
Genome browser
AA seq
954 aa
AA seq
DB search
MYQWRKFEFFEEKYSGKVADDITGKIQCCSSGKGRIVLGCDDGSASLLDRGLKFNYGFQA
HSSSVLFLQQLKQRNFLVTVGEDEQIPSQPPAVCLKIFDLDKMESEGTSTSSPDCIQILR
IFTNQFPEAKITSFLVLEEAPPLLLIVIGLDNGSIYCIQGDIARERIKRFKLQVDNHSDK
SQSSITGLGFRVDGQVLQLFAVTPNTVNLFNMHTQTPTRQTLDQIGSSVTSVGMTDRSEF
IIGRPEAIYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVFADQRTGKNTFNIYDLKNRLI
AHSIVVKEVSQMLCEWGNIILILEDKSTLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQ
ADAAATAEVLRKYGDHLYSKQDFDDAMAQYILTIGHLEPSYVIQKFLDAQRIHNLTNYLE
KLHEKGLASKDHTTLLLNCYTKLKDVEKLNEFIKSEDGPGEQKFDVETAIRVCRAANYHE
HAMFVAKKAGRHEWYLKILLEDLGRYEEALQYISSLELSQAGVTVKEYGKILIEHKPAET
VDILMRLCTEESEPSRKGASSGAFISMLPSPIDFLNIFVHYPHALLEFLEKYTTKVKDSS
AQVEIHNTLLELYLSHDLDFPSISQSNIDKGGNNLAQRPSKAVSNGKAISDKKDVNDDKG
RQERRRKGLTLLKSAWPSELEQPLYDVDLAIILCEMNDFKEGLLFLYEKMKLYKEVIACY
MQVHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEILTYIERDDILP
PIVVLQTLAKNPCLSLSVIKDYIARKLEYESQMIEEDRRAMEKYQEESTTMRKEIQDLRT
NARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRAVLETKRSLE
QSSKNPDQFFQLVKSSKDGFSVIADYFGRGIISKTSNEPTEAHRSNSASSGNDF
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggagaaagtttgaattttttgaggagaagtattctgggaaagtggcagat
gatataactggcaagatccaatgttgttcaagtggcaaaggaaggattgttttgggttgt
gatgatggcagtgcttctttattggatagaggattgaagtttaattatggttttcaagct
cattcttcatctgttctctttcttcaacagctcaagcaaaggaatttcttagtgaccgtt
ggagaagatgagcaaataccttcccagcctccagctgtttgtcttaaaatttttgatctt
gacaagatggagtccgagggaacaagtacatcaagtccagattgtattcaaatactgcga
atatttaccaaccagttccccgaagcaaagattacgtcatttttggttctggaagaggct
ccgccattattactcatagttatagggctggacaatggttccatctattgcattcaagga
gatatagcccgtgaacgcatcaagcgctttaagcttcaggtggataatcattcagacaaa
agccaatcctccatcacgggtctggggttcagagtggatggtcaggtgcttcagctgttt
gctgttactccaaacacagtgaacttgttcaacatgcatactcaaacacctacccggcag
actcttgatcagattggatctagtgtaactagtgttggaatgactgatcgatcggaattc
attattggtcggcctgaggcgatatatttctatgaagttgatggtcgtggtccttgttgg
gcctttgaaggagagaagaaattccttgggtggttccgtggatacttgttatgtgttttt
gcagatcaaagaactggaaagaatactttcaatatttatgacctgaagaaccggttaatt
gcccacagtatagtggttaaagaagtttctcagatgctttgtgaatggggtaacataata
cttattttggaggacaaatcaactttatgcattggggagaaagatatggagagcaagttg
gatatgcttttcaagaagaacctttatacagttgctataaatctcgtccaaagccaacaa
gctgatgccgctgcaactgctgaagtgctgaggaaatatggcgatcacttgtacagtaaa
caagactttgatgacgctatggctcagtatatactcaccattgggcatctagaaccttca
tatgtcatacaaaaatttttggatgcacagagaatccacaatctcaccaattacctggaa
aagttgcatgagaaggggcttgcctcaaaagatcataccactcttttattaaattgttac
accaaattgaaagatgttgagaagctgaatgagttcatcaaaagtgaggatggccctggg
gaacaaaaatttgacgttgaaactgcaataagggtatgcagagctgccaattatcatgag
catgccatgtttgttgctaaaaaagctgggaggcatgaatggtaccttaaaattttgctt
gaagatctaggaagatacgaagaagctttacaatatatcagcagccttgagttgagtcaa
gctggggtgacagtgaaagagtatggcaaaattcttattgagcataagccagctgaaaca
gttgatatactcatgaggctttgcacagaggaatccgaaccgtccaggaagggagcatca
agtggtgcatttatctccatgttgccttctccaattgattttctcaacatttttgtccat
tatcctcatgcacttctggagttccttgaaaaatataccaccaaagtgaaggattcatct
gctcaagtggaaattcataacacactcctggaattgtacttgtctcatgacctggatttc
ccatcaatttcacaatctaatatagataaaggtggaaataatctagcacagagaccttcc
aaagcagtatctaatgggaaggcgatatcagacaagaaagacgtaaatgatgacaaaggt
cgtcaagagcgacgtcggaaggggctgaccttgcttaagagtgcatggccttctgaacta
gaacaacccctatatgatgttgatcttgccataattttatgcgagatgaatgactttaaa
gaagggctgttgtttctttatgagaagatgaaactttacaaagaagttattgcatgctac
atgcaggtacatgatcatgaaggtttgattgcatgctgtaagagattgggtgattcgggt
aagggcggtgacccttctctttgggcagatttgttgaagtattttggtgaactgggagaa
gactgctcaaaagaagtcaaagaaatcttgacttacattgagagggatgatatcttgcct
cccattgttgttcttcagacacttgccaaaaatccgtgcctctccctctctgttatcaaa
gattacatagctagaaagttagaatacgagtcccagatgattgaagaagatcgcagagcc
atggaaaagtatcaggaagaatcaacaacaatgagaaaagagatccaggatctaagaaca
aatgctagaatttttcagcttagcaagtgtactgcttgcacgttcacactcgaccttcct
gctgtccacttcatgtgtatgcactcatttcatcagcgctgccttggcgacaatgagaaa
gaatgccccgagtgtgctcccgagtacagagctgttttggaaacaaagagaagcttggag
caaagttccaaaaatccagaccagttcttccaactggttaagagctcaaaggatggattt
tctgtaattgctgattattttggcaggggtattatcagcaaaactagcaatgaacctact
gaagctcatagatcaaacagtgcttcttccggcaacgatttctag
DBGET
integrated database retrieval system
