Lycium barbarum (goji berry): 132644492
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Entry
132644492 CDS
T09483
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132644492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132644492
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132644492
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132644492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
132644492
NCBI-ProteinID:
XP_060217068
LinkDB
All DBs
Position
6:84969968..84989582
Genome browser
AA seq
1177 aa
AA seq
DB search
MSRPHLLQEKDYSALKELFSHHIESFDHMLDNGLETMLLNIKPVQVVDSYSKLKLRIWFG
KPEIFPPQKERTSKTMHDALYPFECRQAKLSYTGKFLVDICFQYEDGAVIREKFNFGQFP
IMLKSKLCHLRATDDSKKLIAHKEEPSEMGGYFVLKGLERVIRLIILPKRNYPMSMARNS
FRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALV
DTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLQHIGEH
FQPVMTGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLFIFMLQKLFSLIDQTSVLDNPD
SLQNQEVLLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKAIEKNG
PKQMGLAIENMLKTGRLVTQSGLDLQQRAGMTVMAERLNFLRFLSHFRAVHRGASFAGLR
TTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTAACRITSYYDLKGNVKDFFKIRMSILN
VLIAIGMTPSSPKLVQAGPPEVLSVLLDGRIVGSMPSDLVEKAVAHLRRLKLSSTSTIPV
DLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRSISVPAEEGNDLELIGPFEQVYMEISCP
DGGDGGRKHLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAL
NCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSS
VDRGLCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPN
EPYCTIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRKSRNPVIGDKFS
SRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALRGK
FVDATPFSNTVKEGESESSSLVDELGSMLAACGFNYHGVEVLYSGVYGTELTCEIFIGPV
YYQRLRHMVSDKFQVRSTGIVDQVTRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDR
LHTSSDHHIADVCSQCGSVLTSSLIQAPPKRAVQEIFGLPPGREPKKVTCLACCSSKGME
TVAMPYVFKYLAAELAAMNIKMTLKLSNEAGVHDSGS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcctcatttgttgcaagagaaagactactcagctctaaaagagcttttcagc
caccatattgagtcctttgatcacatgcttgataatggacttgaaaccatgcttttgaat
atcaaacctgttcaagttgttgattcctattcgaagctcaagcttagaatatggttcggc
aaacctgagatattcccccctcaaaaggaacgcacttccaagaccatgcatgatgctttg
tatccgtttgagtgtagacaagctaaactttcatatacaggaaagtttttggtggatatc
tgtttccagtatgaggatggagctgtgatcagggagaaatttaattttgggcagttccct
atcatgttgaagtcaaagctatgtcacttgagagctactgatgactccaaaaagttaatt
gctcacaaggaagagccatcagaaatgggcggatattttgttcttaaagggcttgagaga
gtcattcggcttataattttgccaaagagaaactatccaatgagtatggcacggaattca
tttcgtgataggcgagaaggatattctgataaagctgtcgtcataagatgtgtaagagaa
gatcagtctgcagtctcacttaaattgtattatctgaacaatggaagtgcaagacttgga
ttctggatacaaggaagggaatacttgcttcctgttggtatcatattaaaggcccttgtg
gacaccactgatcacgagatatacgtcaatttaacatgttgctacaatgaagaatgtgac
cgtgtaaagggatcagttggaacccagcttgtcggtgaacgagcaaaaattattctggat
gaagttcaggctttatctctttttacccgcgcacagtgcctgcagcatattggggagcat
ttccaacctgttatgactggaatgcaaaatgatagttacaaaactgttgctgatgctgtg
ctgagagactacatatttgtccatctggataacaatcatgataaattcaatctatttatc
tttatgttgcagaagcttttttctctgatagatcagacgtctgtcctagacaatccagac
tctctgcaaaatcaagaagttttgctgccgggtcacttaattaccatatatcttaaggaa
aagctacaagattggctgcttagattacaacggttacttcaagaagaaactgatggtgaa
aaaaagaagtttgagctaagtagcttggcagacgtcaagaaggctattgaaaaaaatggt
cccaaacagatgggcttggctattgagaacatgttaaagactgggagattggttacacaa
tcaggacttgatttacagcagagagctggtatgactgtcatggcagaaaggttaaatttc
ctccgtttcctttcacattttcgagcggttcatcgaggtgcctcatttgctggtcttcgt
actacaagtgtgcggaaattgttgcctgaatcttggggtttcctttgtcctgttcataca
cctgatggggagccatgtggtttgcttaatcatatgactgcagcttgccgcataacatca
tactatgatttgaagggcaatgttaaagactttttcaaaatacggatgtccatattgaat
gtgctgattgcaattggaatgacaccatcatcaccaaagcttgtgcaagccggtccgcct
gaagtgctgtctgtcctactggatggtcgtatcgtgggctctatgccatcggatttagtt
gaaaaagctgttgcccacttgcggagattaaaattgtcatcaacatcaacgattccagtt
gatttggaggttggatacatccctttgagcatgaatggagcatatcctggcctatatctg
ttcacatctccttctaggtttgttcgtcctgtaagaagtatctctgtacctgctgaagag
ggcaatgatctggaactcattggaccctttgaacaggtgtatatggagataagctgcccg
gatggcggagatggaggaaggaaacatttattccctgccacacatcgagaaattcatcca
actaatattttgagtgttgttggcaatcttacaccttggtctgatcataatcagagtcca
cgtaatatgtatcagtgtcagatgggtaaacaaacaatgggtttctcctcacaagcatta
aattgtcgtgctgatcaaaagttatatcaccttcagactcctcaaactccaattgtgcgc
acaaaagcttatgagaagtactgcgttgatgactatccattaggaacaaatgcaattgtg
gcagttttggcttattcaggatatgacatggaggatgctatggtcttaaataaatcatct
gtggatcgtggtttgtgtcatgggcatatataccagacagaaacaattgacttgactgag
caaagcgccaaatctgatcgtgctcagagattgtttagaagaagcaatttggataagtca
tctcatcagctgattgattctgatggtcttccatacgtgggtcagaggattaatccaaat
gagccatattgtaccatttacaatgaaataacgagtcagacaactagtatgaagttgaag
ggttcggagcctgtcgttgttgattatgttgctgtcgatgtgaaaaataaaacgcatctc
cagaaggcgaacatacgatttaggaagtccaggaatcctgtaattggtgataaatttagc
agcagacatgggcagaagggtgtttgctctcaattatggcctgatatcgatatgcccttc
tcaggagttacaggaatgaggccagatcttattattaatcctcacgctttcccttcaagg
atgacgattgctatgctgttggagtcgattgctgctaagggaggtgctttacgtgggaag
tttgttgatgcaacaccgttttctaacacagtgaaggaaggagaatcagaatccagttcg
ctggtggatgaacttggttccatgttagcggcttgtggcttcaattaccatggcgttgag
gtactatatagtggagtatatgggacagaactgacttgtgaaatatttattgggcctgtt
tattatcagcgtctgcgacacatggtttccgataaatttcaggtccgttctactggaata
gtagaccaggtgactcggcagcccatcaaggggagaaagcgtggtggaggtgtccgcttt
ggagaaatggaacgagattcactccttgctcatggagcagcatacttgctgcatgataga
ctccatacaagctcagatcatcacattgcagatgtgtgctctcaatgtggaagtgtccta
acatcatcattgatccaggcaccgccaaaacgagcagtgcaagagatttttggtctgccg
cccggtagagaacccaaaaaggtgacttgtcttgcttgctgttcaagtaaaggaatggag
actgttgcaatgccgtatgtgtttaaatatctagcggctgaattggcagccatgaacatc
aagatgaccctcaaactaagtaatgaggctggagtacacgattctggcagttga
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integrated database retrieval system
