Lycium barbarum (goji berry): 132644584
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Entry
132644584 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-like isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132644584
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132644584
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132644584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_2
zf-CCCH_RBM22
zf-C3HC4
zf-CCCH_DUS3L
zf-CCCH_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
FANCL_C
zf-CCCH_PARP12
zf-CCCH_9
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
132644584
NCBI-ProteinID:
XP_060217153
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All DBs
Position
6:complement(86948047..86968785)
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AA seq
360 aa
AA seq
DB search
MSKKVLCKFFVHGACLKGEYCEFSHDWKDPPNNVCTYYQKGLCAYGSRCRYEHVKVSEQP
SLPSSSAPAQHLLSASPPTTISPGMLADGAGLLSGISSEYLASGGPFYPPNRPVWSENSG
RHDVAEIDNIVELKIINPADQSICSFAVAGNCPRGKNCPYIHGDLCTICAKHCLHPFRPQ
EREEHIKTCEKRQKHLDLLKHSQEIECSVCLERVLSKATAAERKFGILSECDHPFCISCI
RNWRSGSPSSGIDINSTFRTCPICRKLSYFVIPSVIWYSTKEEKQDILDSYKAKLRSIDC
KHFDFGNGTCPFGISCFYKHQYCDGRLEEVVLRHLDHEEGSTVIAKNIRLSDFLSNLRIR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaggttctttgcaagttctttgtacatggtgcatgtctgaaaggggagtac
tgtgagttctcgcatgattggaaagatcctccaaataatgtatgcacatactaccaaaaa
ggattatgtgcctatggcagcaggtgtagatatgaacatgttaaagtttctgaacaacct
tcacttccatcttcgtcagctccagctcaacatctgctctcagcttctcctcccaccact
atctctcctggaatgctagcagatggtgcaggacttctgtcaggcatttcttccgagtat
ttggcttcaggtggacctttttaccctcccaaccgacctgtatggagtgaaaattcaggg
cgtcatgatgtggcagagattgataacattgtcgagttgaagataattaatccagctgat
caatcaatttgctcttttgctgttgctggtaattgtccacggggaaaaaactgtccttat
attcatggagatctgtgtacaatctgtgccaagcattgcttgcatcctttccggcctcaa
gaaagagaggagcatataaaaacatgtgagaagaggcaaaagcaccttgatttactgaag
catagtcaagaaatagagtgcagtgtgtgtcttgaacgtgtactctctaaggcaactgca
gcagagcggaagtttgggatcctttctgagtgtgatcatccattttgtatatcatgtatc
aggaattggcgtagtggttctccttcgtctgggattgatatcaactctacatttaggacc
tgccctatatgccggaagctttcatattttgtcattccaagtgtcatttggtactccaca
aaagaagaaaagcaagatatccttgacagctacaaagccaaactcaggtctattgactgc
aagcattttgactttggcaatgggacttgcccatttggaattagttgtttctacaagcat
caatactgtgatggccgtctggaggaagtggtactgcgtcatcttgatcatgaagaagga
agcacagtgattgctaaaaatattaggctctcggacttcctaagcaatttgagaataagg
tga
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