Lycium barbarum (goji berry): 132644729
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Entry
132644729 CDS
T09483
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132644729
03036 Chromosome and associated proteins [BR:
lbb03036
]
132644729
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
132644729
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Topoisomerases
132644729
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
132644729
Centrosome formation proteins
Centriole proteins
132644729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
132644729
NCBI-ProteinID:
XP_060217320
LinkDB
All DBs
Position
6:complement(89219209..89226159)
Genome browser
AA seq
1464 aa
AA seq
DB search
MATKKLPLQSSNNANISKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWENESMV
HRPVTYVPGLYKIFDEILVNAADNKQRDPKMDALEVVIDPEENLVSVYNNGDGIPVEIHQ
EEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTQFVIETADGKRQRKYK
QVFSNNMGKKSEPIITKCKASENWTKVSFKPDLAKFNMENLEADVVALMRKRVIDLGGCL
GKTVKVKLNEQRIPVKSFEEYCKLFLDATDAKREFLKVKDADGVLRWEICVSLSEGQFQQ
VSFVNSIATIKGGTHVDYVANQIANHVMGVVNKKNKNANIKAHAVKNHLWMFVNALIDNP
AFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDTLLSWADFKNSKDLKKTDGKK
SGKVNVEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAGMSVVGRDHYGVFPLRGKLLN
VREASHKQVSENKEIEAIKKILGLQTGKEYDTVKSLRYGHLMIMTDQDHDGSHIKGLLIN
FIHTFWPSLLKVPSFLVEFITPIVKATHKNGRVLAFYTMPEYESWRNSLGDNSSGWSIKY
YKGLGTSTSKEGKEYFQDLQKHRKDFFWADNQDGESIELAFSKKKIEARKNWLRQFEPGT
HLDQKDKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFFKEAKV
SQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSR
YIYTRLSPIARFLFPKDDDTILDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGTGWSSYV
PNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGIIEKTATKETGATYTVTGIIEEVNETT
LRISELPVRRWTEDYKQFLESMTVSTDKAKDAFIKEVKAYGDENSVHFEVTLSEENLLLA
QQEGLLKKFKLTTTISTSNMHLFDSRGKIKKYDTPEEILEEFYHVRLQYYEKRKRALLEI
LELELLRIENKVKFILGVVKGEIIVNNRKRADLLLELKNKGFTPFPKKKAVEAVAADTTD
DAEDSEESPEESNRGVRASDYDYLLSMAIGTLTLEKVQQLCAERDKLNGEVDEMRNATPK
VLWMKDLDVLDKQLDEQDKIDFQTEEAREKIKKKTMKAAGSKAPKPKPRKTTKKAGVVES
TAEPMDVSVGSTAETAKVTEVVKPKGRGGGSKKAPAKQAKPVAVEDEEDDDEVLALKDRL
AAYNLNSSPDRSEVMETEASKAQKKAPARKAAAQKKTLPSTADVSDDEDEIEISDDEFEP
EVAVEGEKKGGRKPAASKAAAKPPKKRAPAAANKQSLSIGQRLITEVLKPAEEAGVSPDR
KVRKMRESPFNKKSGAVMASPVSSLGSLEVEEQVSEPVVAPKTRPQRVNRGKKTTYVISD
SDTEDEENNDFEPSDDSDFDGDDD
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaaaactcccacttcaatcaagcaacaatgcgaacattagcaaaacaatc
gaacaaacctaccaaaagaaaacccaactcgaacacatccttcttcgacccgatacatac
atcggatctgtcgaaaagcacacacaaacactttgggtatgggagaacgagagcatggta
catcgaccggtcacatacgtgcccggtttgtacaagatcttcgacgagatcttagtaaat
gcagctgataataaacagagagatcctaaaatggacgcgcttgaagtagtgattgatcct
gaagagaatttggttagcgtatataataacggtgatgggattcctgttgagatacatcag
gaagaaggtgtttatgtgcctgagctgattttcgggcatttgttgactagtagtaattat
gatgatgctgagaagaagactactggtggtagaaatggatatggtgctaagcttaccaac
attttttctactcaatttgttattgaaactgctgatggaaaacgacagaggaaatataag
caggttttctctaacaacatgggaaagaagtctgaaccaatcataacaaaatgcaaagca
agcgagaattggacaaaagtttcatttaagccagacttggcaaagtttaacatggaaaac
cttgaagcagatgttgttgctctaatgaggaagagagtgatcgatttgggtggatgtctc
ggaaagactgtcaaggtgaaactcaatgaacagcgcattcccgtcaaatcatttgaagag
tattgcaagcttttcttagatgctactgatgcgaaaagggagttcctaaaagttaaagac
gcggacggagtattaaggtgggagatatgtgtgagtttgagtgaaggacaatttcaacag
gtcagttttgtgaatagcatcgcgacaattaagggtggaactcacgttgattatgtggcc
aaccagatagctaaccacgtaatgggtgttgtgaacaagaagaataaaaatgctaacatc
aaagcccacgcagtgaagaaccatttatggatgtttgttaatgctctcattgacaatcct
gcttttgattcacaaactaaagaaaccttgaccctgcgtcagagcagttttggttcgaaa
tgtgaacttcaaccagattttctgaagaaagtggagaagaatattggcattgtggacact
ctactctcctgggcagactttaaaaatagcaaagaccttaagaagactgatgggaaaaaa
tctgggaaggtcaacgtggaaaagctagaagatgctaatgatgcaggagggaggaattcc
gataaatgcacattgattttgactgaaggagattcagccaaggctctagctatggctgga
atgtctgttgttgggcgagatcactatggcgtgttccctttgaggggtaaactgctaaat
gtaagggaagcaagtcataaacaggtttcagaaaataaagaaattgaagctatcaagaag
attcttggacttcagacaggcaaagaatatgacactgtcaaatcgctcagatatggtcat
ctaatgattatgactgatcaggatcatgatggttcacatatcaagggtctcttaattaat
ttcatccacactttttggccgtccttgctgaaagttccgtctttcttggtggagttcata
acaccaattgtgaaggctactcataaaaatgggagggtactggcattttataccatgcct
gagtatgagtcatggagaaatagtttgggtgataattcaagtggttggtctattaagtac
tataaggggttgggaacaagtacttcaaaggaaggaaaagagtacttccaagatcttcag
aaacacaggaaagattttttctgggcagataaccaagatggggaatcaatagaacttgct
ttcagtaagaagaagatagaagcaaggaagaattggcttagacaatttgagcctggtacc
catctagaccagaaagacaagtacatctcatacaccgaatttgttaacaaagagcttatt
ctgttttcaatggctgaccttcaaaggtccattccatcaatgcttgatggtttgaaaccg
ggtcaaaggaagattctgttttgtgcatttaagaggaattttttcaaggaagcaaaagtt
tcccaattttctggttatgtctctgagcactcagcttaccatcatggtgagcagagtctt
agcagcaccatcattggaatggcacaggactatgttggcagcaataatgtaaatcttttg
caaccaaatggtcaatttggtactcgaaatatgggaggtaaagatcatgcaagctctagg
tacatttacactaggctttcaccaattgcaaggtttctgtttcccaaggatgatgatacc
attcttgattacttgaatgaagatgggcaatctattgagcctacttggtatgtaccaatc
attccaatggtacttgtgaatggcagtgaaggtatagggacgggttggagttcatatgtt
ccaaattataatccaagggaccttgtcgctaatgtaaggcgcttactgaatgatgagcta
atggagccaatggatccatggtataaaggtttcaaaggaataatagagaaaacagcaacg
aaagaaactggagctacctacactgtaactggtatcatagaggaggtcaatgaaacgact
cttaggatttctgagttgccggtccggaggtggacagaggattataagcagtttttggaa
tccatgacagtgtcaactgacaaggccaaggatgccttcataaaggaagtaaaagcctat
ggtgatgagaactctgtacattttgaagtgaccttgtcagaggagaatctgctactggcc
cagcaagagggtttgcttaaaaagtttaagctaactactacaataagcaccagcaatatg
cacctttttgactctaggggcaaaattaagaaatatgacaccccagaagagattcttgag
gagttctaccatgtacgactccagtattatgagaaaagaaagagagctctattagagatt
ctcgaattggagttgctgagaattgagaacaaggtgaaattcatccttggagttgtgaaa
ggagaaatcattgtgaacaacaggaagagagctgatctcttgcttgaattgaagaataaa
ggttttactcctttccccaagaaaaaggctgttgaagctgttgctgcagacacaactgat
gatgcagaagatagcgaagagagtccagaggagtcaaatagaggagttagggctagtgat
tatgactacttgctgtcgatggcaataggaacgttgactcttgagaaggttcaacagctg
tgtgctgagagggataagctgaatggtgaggttgacgaaatgagaaatgcaactccaaag
gttttgtggatgaaagatctcgatgtccttgacaaacagcttgacgaacaagataaaatt
gattttcagactgaggaagctagagagaagataaagaagaagacaatgaaagcagctggg
tcaaaggcgcccaagcctaaaccccgaaaaactactaagaaggctggtgtagtggagtct
actgcggaaccaatggacgtgtcagttggttcaacggcggaaacagccaaagttaccgag
gttgtgaagccaaaaggcagaggaggaggttcaaagaaagctcctgcaaagcaggcaaaa
cctgttgctgttgaagatgaagaagatgatgatgaagtgctagcgttgaaagacagactt
gcagcttacaaccttaactcttctccagatcgctccgaagttatggagactgaagcgtca
aaagctcaaaagaaagcacctgctagaaaggctgctgcgcaaaagaagactctgccatcc
actgcagatgtttctgacgatgaggatgagattgaaattagtgatgatgagtttgagcca
gaggtagctgtggaaggggaaaagaaaggggggaggaaaccagcagcttcaaaagcagca
gctaaacccccaaagaagagagcaccagcagcagctaataagcaatcactaagtattggt
cagagactcataactgaagttttgaagcctgcagaggaagctggtgtctcaccagatcga
aaagtgaggaaaatgagggaatctccatttaacaagaaaagtggagctgttatggcaagt
cctgtttcttccttgggcagtctagaagtagaagagcaagtcagcgaacctgttgtggct
cccaaaactagaccacagagggtaaatcgtgggaagaagacaacatatgttatcagtgat
tctgataccgaagatgaggagaacaatgattttgaaccttctgatgattctgatttcgat
ggagatgatgattaa
DBGET
integrated database retrieval system
