KEGG   Lycium barbarum (goji berry): 132644729
Entry
132644729         CDS       T09483                                 
Name
(RefSeq) DNA topoisomerase 2 isoform X1
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbb03032]
    132644729
   03036 Chromosome and associated proteins [BR:lbb03036]
    132644729
Enzymes [BR:lbb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     132644729
DNA replication proteins [BR:lbb03032]
 Eukaryotic type
  DNA Topoisomerases
   132644729
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    132644729
  Centrosome formation proteins
   Centriole proteins
    132644729
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB Toprim HATPase_c
Other DBs
NCBI-GeneID: 132644729
NCBI-ProteinID: XP_060217320
LinkDB
Position
6:complement(89219209..89226159)
AA seq 1464 aa
MATKKLPLQSSNNANISKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWENESMV
HRPVTYVPGLYKIFDEILVNAADNKQRDPKMDALEVVIDPEENLVSVYNNGDGIPVEIHQ
EEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTQFVIETADGKRQRKYK
QVFSNNMGKKSEPIITKCKASENWTKVSFKPDLAKFNMENLEADVVALMRKRVIDLGGCL
GKTVKVKLNEQRIPVKSFEEYCKLFLDATDAKREFLKVKDADGVLRWEICVSLSEGQFQQ
VSFVNSIATIKGGTHVDYVANQIANHVMGVVNKKNKNANIKAHAVKNHLWMFVNALIDNP
AFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDTLLSWADFKNSKDLKKTDGKK
SGKVNVEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAGMSVVGRDHYGVFPLRGKLLN
VREASHKQVSENKEIEAIKKILGLQTGKEYDTVKSLRYGHLMIMTDQDHDGSHIKGLLIN
FIHTFWPSLLKVPSFLVEFITPIVKATHKNGRVLAFYTMPEYESWRNSLGDNSSGWSIKY
YKGLGTSTSKEGKEYFQDLQKHRKDFFWADNQDGESIELAFSKKKIEARKNWLRQFEPGT
HLDQKDKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFFKEAKV
SQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSR
YIYTRLSPIARFLFPKDDDTILDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGTGWSSYV
PNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGIIEKTATKETGATYTVTGIIEEVNETT
LRISELPVRRWTEDYKQFLESMTVSTDKAKDAFIKEVKAYGDENSVHFEVTLSEENLLLA
QQEGLLKKFKLTTTISTSNMHLFDSRGKIKKYDTPEEILEEFYHVRLQYYEKRKRALLEI
LELELLRIENKVKFILGVVKGEIIVNNRKRADLLLELKNKGFTPFPKKKAVEAVAADTTD
DAEDSEESPEESNRGVRASDYDYLLSMAIGTLTLEKVQQLCAERDKLNGEVDEMRNATPK
VLWMKDLDVLDKQLDEQDKIDFQTEEAREKIKKKTMKAAGSKAPKPKPRKTTKKAGVVES
TAEPMDVSVGSTAETAKVTEVVKPKGRGGGSKKAPAKQAKPVAVEDEEDDDEVLALKDRL
AAYNLNSSPDRSEVMETEASKAQKKAPARKAAAQKKTLPSTADVSDDEDEIEISDDEFEP
EVAVEGEKKGGRKPAASKAAAKPPKKRAPAAANKQSLSIGQRLITEVLKPAEEAGVSPDR
KVRKMRESPFNKKSGAVMASPVSSLGSLEVEEQVSEPVVAPKTRPQRVNRGKKTTYVISD
SDTEDEENNDFEPSDDSDFDGDDD
NT seq 4395 nt   +upstreamnt  +downstreamnt
atggcaaccaaaaaactcccacttcaatcaagcaacaatgcgaacattagcaaaacaatc
gaacaaacctaccaaaagaaaacccaactcgaacacatccttcttcgacccgatacatac
atcggatctgtcgaaaagcacacacaaacactttgggtatgggagaacgagagcatggta
catcgaccggtcacatacgtgcccggtttgtacaagatcttcgacgagatcttagtaaat
gcagctgataataaacagagagatcctaaaatggacgcgcttgaagtagtgattgatcct
gaagagaatttggttagcgtatataataacggtgatgggattcctgttgagatacatcag
gaagaaggtgtttatgtgcctgagctgattttcgggcatttgttgactagtagtaattat
gatgatgctgagaagaagactactggtggtagaaatggatatggtgctaagcttaccaac
attttttctactcaatttgttattgaaactgctgatggaaaacgacagaggaaatataag
caggttttctctaacaacatgggaaagaagtctgaaccaatcataacaaaatgcaaagca
agcgagaattggacaaaagtttcatttaagccagacttggcaaagtttaacatggaaaac
cttgaagcagatgttgttgctctaatgaggaagagagtgatcgatttgggtggatgtctc
ggaaagactgtcaaggtgaaactcaatgaacagcgcattcccgtcaaatcatttgaagag
tattgcaagcttttcttagatgctactgatgcgaaaagggagttcctaaaagttaaagac
gcggacggagtattaaggtgggagatatgtgtgagtttgagtgaaggacaatttcaacag
gtcagttttgtgaatagcatcgcgacaattaagggtggaactcacgttgattatgtggcc
aaccagatagctaaccacgtaatgggtgttgtgaacaagaagaataaaaatgctaacatc
aaagcccacgcagtgaagaaccatttatggatgtttgttaatgctctcattgacaatcct
gcttttgattcacaaactaaagaaaccttgaccctgcgtcagagcagttttggttcgaaa
tgtgaacttcaaccagattttctgaagaaagtggagaagaatattggcattgtggacact
ctactctcctgggcagactttaaaaatagcaaagaccttaagaagactgatgggaaaaaa
tctgggaaggtcaacgtggaaaagctagaagatgctaatgatgcaggagggaggaattcc
gataaatgcacattgattttgactgaaggagattcagccaaggctctagctatggctgga
atgtctgttgttgggcgagatcactatggcgtgttccctttgaggggtaaactgctaaat
gtaagggaagcaagtcataaacaggtttcagaaaataaagaaattgaagctatcaagaag
attcttggacttcagacaggcaaagaatatgacactgtcaaatcgctcagatatggtcat
ctaatgattatgactgatcaggatcatgatggttcacatatcaagggtctcttaattaat
ttcatccacactttttggccgtccttgctgaaagttccgtctttcttggtggagttcata
acaccaattgtgaaggctactcataaaaatgggagggtactggcattttataccatgcct
gagtatgagtcatggagaaatagtttgggtgataattcaagtggttggtctattaagtac
tataaggggttgggaacaagtacttcaaaggaaggaaaagagtacttccaagatcttcag
aaacacaggaaagattttttctgggcagataaccaagatggggaatcaatagaacttgct
ttcagtaagaagaagatagaagcaaggaagaattggcttagacaatttgagcctggtacc
catctagaccagaaagacaagtacatctcatacaccgaatttgttaacaaagagcttatt
ctgttttcaatggctgaccttcaaaggtccattccatcaatgcttgatggtttgaaaccg
ggtcaaaggaagattctgttttgtgcatttaagaggaattttttcaaggaagcaaaagtt
tcccaattttctggttatgtctctgagcactcagcttaccatcatggtgagcagagtctt
agcagcaccatcattggaatggcacaggactatgttggcagcaataatgtaaatcttttg
caaccaaatggtcaatttggtactcgaaatatgggaggtaaagatcatgcaagctctagg
tacatttacactaggctttcaccaattgcaaggtttctgtttcccaaggatgatgatacc
attcttgattacttgaatgaagatgggcaatctattgagcctacttggtatgtaccaatc
attccaatggtacttgtgaatggcagtgaaggtatagggacgggttggagttcatatgtt
ccaaattataatccaagggaccttgtcgctaatgtaaggcgcttactgaatgatgagcta
atggagccaatggatccatggtataaaggtttcaaaggaataatagagaaaacagcaacg
aaagaaactggagctacctacactgtaactggtatcatagaggaggtcaatgaaacgact
cttaggatttctgagttgccggtccggaggtggacagaggattataagcagtttttggaa
tccatgacagtgtcaactgacaaggccaaggatgccttcataaaggaagtaaaagcctat
ggtgatgagaactctgtacattttgaagtgaccttgtcagaggagaatctgctactggcc
cagcaagagggtttgcttaaaaagtttaagctaactactacaataagcaccagcaatatg
cacctttttgactctaggggcaaaattaagaaatatgacaccccagaagagattcttgag
gagttctaccatgtacgactccagtattatgagaaaagaaagagagctctattagagatt
ctcgaattggagttgctgagaattgagaacaaggtgaaattcatccttggagttgtgaaa
ggagaaatcattgtgaacaacaggaagagagctgatctcttgcttgaattgaagaataaa
ggttttactcctttccccaagaaaaaggctgttgaagctgttgctgcagacacaactgat
gatgcagaagatagcgaagagagtccagaggagtcaaatagaggagttagggctagtgat
tatgactacttgctgtcgatggcaataggaacgttgactcttgagaaggttcaacagctg
tgtgctgagagggataagctgaatggtgaggttgacgaaatgagaaatgcaactccaaag
gttttgtggatgaaagatctcgatgtccttgacaaacagcttgacgaacaagataaaatt
gattttcagactgaggaagctagagagaagataaagaagaagacaatgaaagcagctggg
tcaaaggcgcccaagcctaaaccccgaaaaactactaagaaggctggtgtagtggagtct
actgcggaaccaatggacgtgtcagttggttcaacggcggaaacagccaaagttaccgag
gttgtgaagccaaaaggcagaggaggaggttcaaagaaagctcctgcaaagcaggcaaaa
cctgttgctgttgaagatgaagaagatgatgatgaagtgctagcgttgaaagacagactt
gcagcttacaaccttaactcttctccagatcgctccgaagttatggagactgaagcgtca
aaagctcaaaagaaagcacctgctagaaaggctgctgcgcaaaagaagactctgccatcc
actgcagatgtttctgacgatgaggatgagattgaaattagtgatgatgagtttgagcca
gaggtagctgtggaaggggaaaagaaaggggggaggaaaccagcagcttcaaaagcagca
gctaaacccccaaagaagagagcaccagcagcagctaataagcaatcactaagtattggt
cagagactcataactgaagttttgaagcctgcagaggaagctggtgtctcaccagatcga
aaagtgaggaaaatgagggaatctccatttaacaagaaaagtggagctgttatggcaagt
cctgtttcttccttgggcagtctagaagtagaagagcaagtcagcgaacctgttgtggct
cccaaaactagaccacagagggtaaatcgtgggaagaagacaacatatgttatcagtgat
tctgataccgaagatgaggagaacaatgattttgaaccttctgatgattctgatttcgat
ggagatgatgattaa

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