Lycium barbarum (goji berry): 132644782
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Entry
132644782 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132644782
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132644782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132644782
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132644782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
WD40_like
Beta-prop_SCAP
Beta-prop_LRRK2
PEP5_VPS11_N
eIF2A
Ge1_WD40
VPS8_N
WD_LRWD1
TAF1C_beta-prop
Beta-prop_IP5PC_F
VID27
Motif
Other DBs
NCBI-GeneID:
132644782
NCBI-ProteinID:
XP_060217365
LinkDB
All DBs
Position
6:complement(90355451..90362242)
Genome browser
AA seq
907 aa
AA seq
DB search
MGIFEPFRAIGYITTNVPFSVQRLGTETFVTVSVGKAFQVYNCAKLSLVLVGPQFPKKIR
ALASYREYTFAAYGSDIAVVKRAHQVATWSGHSAKVNQLLLFGENVLSVDVKGNIFIWQF
KGIDQNPAPIGHIKLENKFSPSCIMHPDTYLNKVILGSQEGALQLWNISTKKKIYEFKGW
GSSITCCISSPALDVIAVGCADGKIHVHNIRYDEEVATFSHSTRGAVNALSFSTDGQPLL
ASGGSSGVISIWNLEKKRLQSVIKEAHDSSIVSLQFFANEPVLMSSSADNSMKMWVFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLKLKEEEIKLKPVIAFDVAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILTPC
PENPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGNYVDLLDGESAAHNGEVIGI
ACDATNTIMISAGYHGDVKVWDFKGRELKYKWEVGCSLVKIVFHRSNGLLATAGDDLVIR
LFDVIAQRLVRKFEGHTDRITDTCFSEDGKWLLTSSMDGTLRIWDVILGRQIDAIQVDLS
ITGLSLSPNMDILATSHVDQNGVYLWVNQAMFSGAASFSSYGSGKEIVNVKMPSISSAKD
GENSDNRTILKPFESSDTSQFLNSSHQIPDLVTLSLLPKSQWQSLINLDIIKARNKPIEP
PKKPEKAPFFLPSIPSLSGEILFKPSEGGNEENNTQNTGLEEGSKKTDLPASKFLQILQS
STEKENFATFTDYIKSLSPSILDMELRMLQIIDDDDEQEPEKRPELHFIELLLDYFIHEI
SRRSNFEYIQALIRLFLKIHGETIRRQSKLQDKARKLLEVQSAVWQKVDKLFQSSRCMVS
FLSNSQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggatctttgaaccatttagagcaattggatacattacaaccaatgttcctttctct
gtacagaggctcggtactgagaccttcgtcactgtcagtgttggcaaagctttccaagtt
tacaactgtgctaaactcagtttggttcttgttggtccgcaatttccaaagaagattcga
gctctcgcttcttatcgtgaatatacttttgctgcctatgggagtgacattgcagttgtt
aagcgtgctcatcaggtggctacttggagtggacatagtgctaaggtgaaccagttgctt
ctttttggtgaaaatgtcctaagtgttgacgttaaaggcaatatcttcatatggcaattt
aaaggtatagatcaaaatcctgctccgatcggacacataaagctagagaacaaattctct
cctagctgcataatgcacccggatacctacttaaataaggttattttgggaagtcaagaa
ggtgcgttgcaactctggaatataagcacaaagaagaaaatttatgagttcaagggatgg
ggatcttctattacatgttgcatttcatctccagcactagatgttattgctgttggatgc
gcggatgggaagattcatgttcataacattcgctatgatgaagaggtagctacatttagt
cactctacgagaggcgctgttaatgccttgtcattcagcactgatggccagccccttcta
gcttctggaggttcatctggtgttataagcatatggaatcttgagaagaaaaggttgcag
tctgtcatcaaggaagcccatgactcctccatagtgtcacttcagttctttgctaatgag
ccagtcctcatgagttcatctgcagacaattcaatgaaaatgtgggtcttcgatacaagt
gatggggaccctcgtttactacggtttagaagtggtcatagtgctcctcctctatgtatc
aagttctatgcaaatgggcgtcacattttatctgctggtcaagatcgagcatttcgtctt
ttttctgttgttcaagatcaacaaagtagagaactttcccagcgacatgtttctaaaaga
gcgaagaagcttaagttgaaagaggaggagataaaattgaagcctgttattgcattcgat
gttgctgaaattagggaacgtgattggtgcaatgtggttacatgtcacatggacaccccg
cgtgcttatgtatggaggcttcaaaattttgttcttggcgagcatatcttaactccatgc
cctgaaaatccaactccagtcaaggcttgcgctattagtgcctgtggcaattttgctgta
cttgggactgctggtggttggattgagcgatttaatcttcagtcaggaattagccgtgga
aattatgttgacttgttggatggtgaaagtgctgctcacaatggggaagtaattggcata
gcttgtgatgcaacaaataccatcatgattagtgctggataccatggcgatgtaaaagtt
tgggacttcaaaggacgcgagttaaaatataaatgggaggttgggtgttccttagttaag
attgtgttccaccgttctaatggtcttttggccactgcgggagatgacttagttatccgt
ctatttgatgttattgcacagaggttggttcgtaaatttgagggtcatactgaccgtatt
actgatacatgctttagcgaggatgggaaatggcttttgacatccagtatggatgggacg
ctcagaatttgggatgtaattttaggtagacagatagatgcaatacaagttgatctgtct
atcactggattatctttatcgcctaatatggatatcttggccacatctcatgttgatcaa
aatggcgtctatctgtgggtcaatcaagctatgttttctggagctgccagcttttcatca
tatggaagtggaaaggaaatagtcaacgtgaagatgccgtccatttcttctgcaaaagac
ggtgaaaacagtgataacagaactatccttaaaccatttgagtcctctgatacttctcag
tttctaaattcaagtcatcaaattccggatctagtcactctttcactattgcctaagagt
caatggcagagcttgatcaacctggacataataaaagcccgcaacaaacctatcgagcct
ccaaagaaacctgaaaaggcaccttttttcttgccttcaattccatctctgtccggtgag
atattatttaaaccgagcgaaggtggtaatgaggagaataatacacaaaatacaggattg
gaagaaggcagtaagaaaactgatcttccagcatccaaattcttgcaaattcttcagtca
agcactgagaaagagaattttgcaacattcactgattatatcaaaagcttgtcgccttca
atattggatatggagctccgaatgcttcagataatagatgatgatgacgagcaggagccg
gagaagagaccagaattgcatttcattgaactgctacttgattactttatacatgagatt
tcacgcagaagcaattttgagtatatacaggcactgattagattgtttctgaagatacat
ggtgaaacaattcgacgtcagtcaaaactgcaggataaggcaagaaagcttttagaagtt
caatctgcagtttggcaaaaagtagataaattgttccaaagttccagatgcatggtctcg
tttcttagcaactctcagttttga
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