Lycium barbarum (goji berry): 132644854
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Entry
132644854 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase HEL2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132644854
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132644854
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132644854
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
RING_ZNF598
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
132644854
NCBI-ProteinID:
XP_060217482
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All DBs
Position
6:complement(93418623..93424868)
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AA seq
898 aa
AA seq
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MDDSCAVCAETLEWVAYGACGHKDVCSTCVARLRFICDDRRCCICKTEANVVFVTKALGD
YTRMISDFSVLPSEPKEGRIGSYWYHEDTQAFFDDLDHYKMIRAMCRLSCSVCDKMEGSA
GDGMKRRARFRNIEQLKGHLFHQHKLLMCSLCLEGRKVFICEQKLYTRAQLNQHIHTGDS
EVDGTESERGGFMGHPLCEFCRTPFYGDNELYSHMSTEHYTCHICQRQHPGQYEYYKNYD
DLEIHFRSNHFLCEDESCLAKKFVVFQSEPELKRHNTLEHGGRMSRSQRSAALQIPTSFR
YRRSNEQDNRRGRARSFRRDNPESELSMAIQASLETANADRRLHDTSSNRRVASDQTVTN
DDDLLIPPFESLTTDSEPASRYLQAVSQISRNSQLQESSFPPLAVPPSNSQPRPQSDALP
QNTMASHLRRKQNKNTKKLPSSSPAWPATTGHTTPVTGHQPAWPATTGHTPPAIGHQPAW
PVISTASGSSSSSRHSKAAKDKPSAPVITPQDAWPAVNSAPGSASSSSQIKPATAADRPP
SSSYLNSVAARSSLVHESSSSSVGSSRSWAHSNRMSHSLSAPNLVQSGSFDSSTPDFPPV
SAVQTRKLPASGQQTSTNVEDVQTANKSLVERMRIALEFDQDKFTAFKDISAEYRQGVID
AETYLAYVEQFGLLHLVLELARLCPDAERQKTLIDTYNANLGGTVPMQNFLSGGNRLKDG
KSSKKGKGKAIDAGNGTSKDNMADSILSTVRKLQSSHKVPEDDVEVLSRDGYRSAKGKSK
STLNESEEELNSRGKPLKLDACQNDLSARDVSNHSSGNNDGKSKQRKKTSKFYRVRLGDG
SVETLLNLNGSNPDLDPDPERKETSDEQSNPESLPVRGVWRNGGGQKLVAMTSKGPKK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgctgtttgcgctgaaaccctagaatgggttgcctatggagcttgc
ggtcacaaggacgtttgctctacctgtgtcgctcgtctgcgattcatctgcgatgatcgc
cgttgttgtatttgcaagaccgaagctaacgttgtctttgtcaccaaggctctaggagat
tatacgaggatgattagtgacttctcggtattgccatctgaaccaaaagaaggtcgaatt
ggttcttattggtatcatgaggacacccaggctttctttgatgatttagaccactacaag
atgatcagggcaatgtgcaggctttcttgtagtgtgtgtgataagatggaggggtcggct
ggtgatggcatgaagagaagagcaaggttcagaaatattgagcagttaaaaggtcattta
ttccaccagcacaagttgctcatgtgcagcttatgtttggaaggaagaaaggtatttatc
tgtgagcagaaattgtacacaagggcacagctgaatcagcatatacacactggtgattct
gaggttgatggtactgaaagtgaaagaggtggattcatgggtcaccctctgtgtgaattc
tgtaggaccccattttatggggataatgagttgtattctcatatgtcgactgaacattat
acttgtcatatatgccagaggcagcaccctgggcaatacgaatactacaagaattatgat
gacctagagatacacttccgcagtaatcatttcttatgtgaagacgagagctgtcttgca
aaaaagtttgttgttttccaatctgaacccgagttgaagaggcacaatactctcgagcat
ggaggtcgtatgtcgcgttcccaacgcagtgctgccttgcagataccgacgagttttcga
tatcgccgcagtaatgaacaggataatcgtcgtggaagggcccgatcatttaggcgtgat
aaccctgagagtgaactctccatggccattcaagccagtttagagactgctaatgcagat
agaagacttcatgatacgtcaagcaataggagggtagcttctgatcaaacggtaacaaat
gatgatgatctccttattccaccctttgaatctttgactactgattccgagccagcttca
agatatcttcaagccgtgtctcaaatttccagaaattcgcagcttcaagagtcctcattt
cctccccttgccgtgcctccttctaatagtcaaccaagacctcagtctgatgctttaccc
cagaacactatggcatcacatctgcgccgaaagcaaaacaagaatacaaaaaagctccct
agttcatctcctgcatggccagcaacaacaggtcacacaacaccagtaactggtcatcag
cctgcctggccagcaacaacaggtcacacaccaccagcaattggtcatcagcctgcctgg
ccagtgataagtactgcttctggatcatcatctagttccaggcatagtaaggcagcgaag
gacaaaccttctgcaccagtaattacccctcaagacgcttggcctgctgttaatagcgct
cctggatcagcatcaagctctagccagattaagccggcaactgcagcagatagacctcca
tcatctagttatttaaactctgttgctgctcgatcttcattagtgcatgaatcatcttct
agctcagttggttcatcaaggagttgggcccacagcaatagaatgagccattccttgtca
gccccaaatcttgttcagagcgggtcttttgactcttctacccctgatttccctccagtc
tctgctgtgcagactcgcaaacttcctgcaagtggccagcagacatccacaaatgtggaa
gatgttcaaactgcaaataaatctttggtagaaaggatgcgtatcgctctagaatttgat
caagacaaattcacggcatttaaggatatctctgcagaatatcgtcaaggtgtaatagat
gctgagacatacctggcatatgttgaacagtttggcttgttgcatctcgttcttgagttg
gctagactatgccctgatgctgagaggcaaaagacactaattgacacctacaatgctaat
ttaggaggcaccgtccctatgcagaattttctaagtggtggcaatcgcttgaaagatggt
aaaagttctaagaaaggtaaaggcaaggcaatagatgctggaaatggtacttcaaaggat
aacatggcagatagcattttaagtactgtgaggaaattgcagtctagccacaaggttccc
gaagatgatgtggaagtgttgtcgagagatggttatcggtctgctaaaggtaaatcaaaa
tcgaccctgaatgaatccgaggaagaattaaattcccgaggcaaacctttaaagctggat
gcctgtcagaacgacttgtccgctagagatgtatcaaatcacagttcagggaataatgat
gggaaaagcaagcagcggaagaaaacttcaaagttttacagagttcgtttaggtgatgga
tctgttgaaacacttctaaatctcaatggttcaaaccctgatctggatccagatccagag
agaaaggagacatcagatgaacaaagtaaccctgaaagtttgcctgtgcgtggtgtttgg
cgaaatggaggaggtcaaaagcttgtagctatgacttcgaaaggtccgaaaaagtga
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