Lycium barbarum (goji berry): 132645082
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Entry
132645082 CDS
T09483
Name
(RefSeq) serine/threonine-protein phosphatase PP2A-5 catalytic subunit
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
lbb04136
Autophagy - other
lbb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132645082
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
132645082
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132645082
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132645082
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132645082
04131 Membrane trafficking [BR:
lbb04131
]
132645082
03036 Chromosome and associated proteins [BR:
lbb03036
]
132645082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132645082
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132645082
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
132645082
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132645082
Membrane trafficking [BR:
lbb04131
]
Autophagy
Other autophagy associated proteins
Others
132645082
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132645082
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132645082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
IBV_3B
Motif
Other DBs
NCBI-GeneID:
132645082
NCBI-ProteinID:
XP_060217840
LinkDB
All DBs
Position
6:101918380..101928623
Genome browser
AA seq
312 aa
AA seq
DB search
MSSDLIANTQGNLDEQISQLMQCKPLSEPEVRALCEKAKEILMEESNVQPVKSPVTICGD
IHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGN
HESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETL
DNVRSFDRVQEVPHEGAMCDLLWSDPDDRCGWGMSPRGAGYTFGQDISEQFHHTNNLKLI
ARAHQLVMEGYNWSHEQKVVTIFSAPNYCYRCGNMASILEVDDCRGHTFIQFDPAPRRGE
PDVTRRTPDYFL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggatctgatagctaacacacaaggtaaccttgatgagcagatttctcagctt
atgcagtgcaagcctttatccgagcctgaggttagagcattatgtgagaaggctaaggag
atactaatggaagaaagtaatgttcagccagtaaaaagtcctgtgactatatgtggtgat
atccatgggcagttccatgatctcgccgagctttttaggattggtggacagtgtccagat
acaaattatctgtttatgggtgattatgttgaccgtggatactattcggtcgaaaccgtt
actctattggtagctctgaaagtgcgctatccccaacgactaacaattctcagaggaaat
catgagagccgacagatcacacaagtctatgggttctatgatgaatgcttgcggaagtat
ggcaatgctaatgtttggaaaacatttactgatctatttgattattttcctttgacagca
ttggttgaatccgaaattttttgtttgcatggaggactgtctccatctattgaaaccctt
gataatgtaagaagcttcgaccgtgtccaagaagttcctcatgaaggggccatgtgcgat
cttttgtggtcagacccagatgatcgttgcggttggggtatgtcaccccggggtgctgga
tacacttttggacaggacatttctgagcaatttcaccataccaacaatctaaagctgata
gctcgagctcatcaattggtcatggagggatataactggagccatgaacaaaaggttgtc
actatttttagcgcaccaaattattgttatcgatgtggaaacatggcctccattttggaa
gttgatgactgcagagggcacacttttatccagtttgatccagctccaagaaggggagaa
ccggatgtaacaaggaggacccctgattacttcttataa
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integrated database retrieval system
