Lycium barbarum (goji berry): 132645313
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Entry
132645313 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132645313 isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132645313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132645313
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
132645313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
132645313
NCBI-ProteinID:
XP_060218210
LinkDB
All DBs
Position
6:107614453..107629804
Genome browser
AA seq
1493 aa
AA seq
DB search
MVLKQIASRKRPSKSNTGFIPPFAQPTKIPKSSNQDKNVPQIASEKSGQSQTVNSIQKMI
SVLADAGCTLINPSGPPCLPSDLHKLRNQLNRLFSSHSSLKSEFLQGLSAYVNSPSNLRR
FLSPSKRDGLGLVRSDSLARVLLLVPSVQSDIQNLLLEKLPEYFDVEPAGNIGGRSSSLC
LEEDIARLILNQFRWLDFLVDSEVFTEKLFQVLSICPVHLKKEIIGSLPEIIGEKNNKTV
VDLLQEMLREDSSIIVPMLDCFSNLHLDDMLQEQVITVALSCIRTIDAEHMPYLLRFLLL
LATPTNTRRIISHIRQQLKLVGASNVRTTQQSKMKGKSVVNNAEASILDALRTSLRFNKV
LCQETLNELKSLEKVQDHKVIDIWLLTLIYMNSEPLQKSVEKLLKKKILEGCIVETMFDQ
CVSGNTDLTRDYLPTLLSISEYLLACKEDKAREFGIRMYTNLFKELVDSYSRQEVLGALI
THVGSGISHEVSSAMDVMVLLASKYSQELVPLSSHITGILDYLETFSVGNLHKVYEAFSL
LAFSAEVSTGPFGSPISNELLVIVRKQLSNPDLIYKKMGLIGTLKIVSYLGDAKTTKHLS
SSQKSNYKEALELLETSMNSCKQLPLPLIMFYDELALTLKKKALHPAIVEWTSKHVGDFE
SKFLCDLDGGELMVKELYCGLEGDLWMNLDGDISPICLNILPLVSSSLRAASSLQILPAN
FVLLSSIEGLANQGSLAGIDALLGCPIHLPSSKYFREPLWGSLSGKQKQIIILSLYYAAN
WLRELLNAFCTQAADECNVVSQATREEITLKLFKRLRNLVFLDSLLNSSLRQSCFSLPEL
QPHLESLSLNQLDHNRDQEMKNENGNAGLSQKKKKVKKDSQASLTDGKLRQPTIMDALRK
AGAVPSQEPSAGPTGTCSKGSAPEPSENQPRNLNMPANVDVSAAVEHVEAQRHKFRPLLL
DCFAILAFQKTQDSCCADPASELPICLYILRDLNRKLDYYSPRRHLMVRRMSIPPAFGEM
KVIEFISKIQPLFPSLRRHLDSAISGVREDTETCPDHWKIHSAFAGNPDIPNITSSRPSV
SRSVIKEALQCFGKMLNIPDVQRDRSVLCDLLEAFQPISITDCFFQGMQLIPSPGDIGYL
YAGAYSFVGDIFDAACAVSFALASEVLLSLESVLVSIRTILDNDLNDIGKDIRTGFSKEL
LSFLSKKLGTFAYKLLMQKCDGVNDIEDGQKVKAEVIQKLLRIYLENCQSTSDSLSELAC
SVLPQVSSHKSAVEDGCIFPTLCPATFCIWYRVMHEENLAMINRLVKEISLLEKARGGGE
AEDVKCLLKNLQQSVNVIVSLVNMCKTHDKVNVRAIAVKFGGKFVDSFLKAFGFLQGQFE
LHREHIIQMVRELQTATRTIQTLCSEAKGMKQTAITSKIPITKRSMERFLFRVKELLHST
SSGCTFWMGNLKHKNLMGDVVSSQAYVGDQNDYTDNVSTENMDINEPTDIAGE
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggttcttaagcaaatcgcttctcgtaaacgtccttcgaaatccaataccggattcatt
cctccatttgctcagcccaccaaaatccccaaatcctcaaaccaggacaaaaatgttcca
caaatagcttcggaaaaatcagggcaatcgcaaactgtaaattcaattcagaaaatgatt
tcagttttagcggatgctggttgtacactgattaatccttccggtccgccatgtctacca
tctgatctacataagctaaggaaccaactcaaccgtctcttctcatcccattcatcgcta
aaatctgagttcctccaaggtctctccgcttacgtgaactctcccagtaaccttcgccgc
tttttatctccttcaaaacgtgatggacttggattggtacgaagtgacagtctggcaaga
gtactgctactggttccttcagtccaatcagacattcaaaacttgctgcttgaaaagctt
cccgagtattttgatgtggaacctgctggaaatatcggagggagatcatcatctttatgt
cttgaagaagacatagcaaggctgattctgaaccaattccgatggcttgacttccttgta
gattcagaagtatttacagaaaagctgtttcaagtgttatctatttgcccggttcacttg
aagaaggagataattgggtccttgcccgagattattggggagaaaaacaacaaaactgtc
gtagatttgcttcaggagatgcttcgagaggattcttccattatcgttcccatgctcgat
tgtttctctaacctccatttggatgatatgttacaagaacaggtcattacagtggcgtta
tcttgtatccgaactattgatgcggagcatatgccctaccttttgagattcttactgctt
ttggctacacctaccaatactcgtaggattatttcacacatccgacaacagctcaaactt
gttggagcatcaaatgttcggaccacacagcagagtaagatgaagggaaagtcagtcgtc
aacaatgcagaagcttcaatacttgatgccttgcgaacaagtcttcgatttaacaaagta
ctttgccaagagacattgaatgaactgaaaagccttgagaaagttcaggatcacaaggtg
atagacatatggttgcttacgcttatatacatgaacagcgagcctttacaaaagagtgtt
gagaagttactgaagaagaaaattcttgagggctgtattgtggaaactatgtttgatcaa
tgtgtttctgggaatacggatttgactcgggattatcttcctaccctcctttccatttct
gagtacttactggcttgcaaagaagacaaagctcgggaattcggcattcgcatgtacaca
aatctattcaaagagcttgtggatagttattcaagacaggaagtccttggagcattaatt
acgcacgtgggctctgggataagtcatgaagtgagttctgctatggatgtgatggtcctc
ctagcctcaaagtactcacaagagttggttccgctttcttctcatataactggcatctta
gattacttggagacatttagtgttggaaacttgcataaggtgtatgaagcattcagtctt
ctggcattctctgctgaagtgagtacagggccctttggatctcctatttcaaatgaacta
ctagtgattgtaagaaagcagctgagtaatcctgatcttatttataagaagatgggctta
attggcactcttaagatagtctcctaccttggggatgcaaaaactacgaagcatctttca
tcatctcagaagtcaaattacaaggaagctttggagcttttggaaacatctatgaactct
tgcaagcagctgccacttccattaattatgttttatgatgaactggctttaacattgaag
aaaaaagcacttcatccagccatagtggaatggacaagcaaacatgttggggactttgaa
tcaaagtttttgtgtgaccttgacggtggggagcttatggtcaaagagttatattgtggt
ttggaaggagatttatggatgaacctcgatggagacatatctcctatatgtctcaatatc
ttgccacttgtatcctcttctttgcgggctgcttcttcgctgcaaattcttcctgcaaac
tttgttttgctatcttcaattgaggggttggcaaatcaaggatctcttgcaggaattgat
gcacttcttggctgccctatacaccttccgtcctctaagtacttccgtgaaccgctttgg
ggatctttaagtggaaagcaaaagcaaatcattattctatcattgtactatgctgccaat
tggctgcgggaactgctcaatgccttttgtactcaagcagccgatgaatgtaatgttgtc
agtcaagcaacaagagaggagataactcttaaactatttaagcggttgaggaaccttgta
tttctggacagcttgctaaacagttccctaagacagtcctgcttttctttacctgaactc
caacctcatctggagtccttgtcactgaaccaacttgatcataacagagatcaggagatg
aagaatgagaatggtaatgctgggctatcacaaaagaagaagaaagtgaagaaggacagc
caagcatcacttactgatggaaaacttaggcagccaaccatcatggatgctttgaggaaa
gcaggtgcagttccaagccaggaaccaagcgcgggtcctactggaacttgttctaaaggt
agcgcgcctgagccatcagaaaatcaaccacgtaatttgaatatgccagcaaatgtagat
gtttctgccgctgtggagcatgtggaagcacaaagacacaaattcaggcctcttttgcta
gattgctttgccatcttagcttttcagaagactcaggattcctgctgtgcagatccagct
tctgagttgccgatttgtctatatattctgagggatctcaacagaaagctggactactac
agtccacgaaggcatttaatggttagacgcatgagtattcctcctgcttttggtgagatg
aaagtaatagagttcataagcaaaattcagccactatttccttcccttagaaggcatttg
gattctgcaatatctggtgttagagaagatacagaaacatgcccagatcattggaaaatc
cattctgcctttgcgggaaatcctgatatacccaacattactagctctagaccatcagtt
tctagatctgtcataaaagaggcacttcaatgctttggcaagatgctaaacattccggat
gttcagagagacagatcagtactttgtgatcttctagaggcattccagccaatcagcata
acagactgctttttccaaggcatgcaattgattccatcaccaggagacataggttattta
tatgctggtgcatactcgttcgtgggggatatctttgatgcagcatgtgctgtctcattt
gctttggcttccgaagtattgttaagcttggaatcggtacttgtgtctatccgaactatc
ctagataacgatctcaatgatattggaaaagatatccgtacaggtttttcaaaagagcta
ctttcttttctgtccaagaagctgggaacttttgcttacaaactcttgatgcaaaagtgt
gatggtgttaatgacattgaagatggtcagaaagtcaaagcagaggtcattcaaaagctt
ttacgaatttacttggaaaattgccagtccacttccgattccctaagtgagcttgcctgc
tctgttttgccccaggtttcatcacacaaatctgcagtggaggatggctgtatttttcct
actctctgtcctgcaacattttgcatttggtaccgggtaatgcatgaagagaatcttgcc
atgattaaccgcttggttaaggaaatttcacttctggagaaagccaggggtggtggtgaa
gcggaagatgtcaaatgccttctgaagaacctacaacaatctgttaatgtgattgtatct
ttagtcaacatgtgcaagactcatgataaggtcaatgtccgtgcaattgctgtcaagttt
ggtgggaagtttgttgactctttcctcaaagcttttggcttcttacaggggcaatttgaa
ttacaccgtgagcatataattcagatggttagagagcttcagacggcaacgagaactata
cagacgctgtgttcagaagcaaagggtatgaaacaaacagcaataaccagcaaaatcccc
atcaccaagagatctatggagcggttcttatttcgtgttaaggaacttcttcactcaacg
tcaagtggatgcactttttggatgggcaatctaaagcataaaaacttgatgggggatgta
gtaagctcccaagcatatgtaggtgatcaaaatgactatacggacaatgtttcaacagaa
aatatggatataaatgaacccaccgatattgctggtgaatga
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