Lycium barbarum (goji berry): 132645327
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Entry
132645327 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132645327
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132645327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132645327
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132645327
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132645327
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132645327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
PWI_ABCF3
Motif
Other DBs
NCBI-GeneID:
132645327
NCBI-ProteinID:
XP_060218239
LinkDB
All DBs
Position
6:complement(107885523..107892872)
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AA seq
678 aa
AA seq
DB search
MLPGQNSRPQHPSQFHTNGTPPLQIMGNPGSFMPNPMQIQPQMANTQFPNGQLLAFQMNQ
MNNANSQQKGQFLAQNVVNPPQFLNQNVGFGGFPNPMQNINQLLQLQMAMQMASYAQVVP
GSVPMYPNQVSQGMGIQNSNIAMNGHLGRANGGGNVQQPMNGNFSKQMGNVSQQSPLMNS
FGVVQQPQTQNFNAHASANSQVSQGMGPPSSNFGMNAHLGLVNGNVAVQQSNNGLSKQMP
NVTQQMQGQLPLMNPFGFVQQPQTQNFNAASSANTQVCQGVGPQISNFGMNAHLGLLNVN
GAVQHMPNVNQQLLGQLPLMNPFDFVQQPQNQNFNAVASTNTQANPGRVVGLNQSKGNQQ
NSYNSNFCGNHKNSKFGKGKFSNHDKSHEKGHQRNGEKKVDLANSVKPEKQKKRSLVVTY
SAQEIRRWREERRKNYPSKANIEKHLTEKMVESEDSSCAVKLRRQQLKEILAKQAELGCE
VAEIPPSYLSDTEKQADGRDRTRPLSRKERFQKRFNKREKFNRNDRFSKKRRFGNSDSSN
TCDQKGFPAGKWNVNRDSVTQVTKNAREPTLLQKLLSSDIRRDKRRLLQVFRFMTMNSFF
KDCPEKPLRFPQVLLKETGEEIEAAEEIYDAIDATIEKSSDGCNSDNEDNIAEIKEAVSE
LQENGNNESEEPQGETDH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttacctggtcaaaattcacgtcctcagcatccttcccagttccacaccaatggaact
cctcccctacagattatgggtaacccaggaagctttatgccaaaccctatgcaaattcag
cctcagatggcaaatacccaatttccaaatgggcagcttttggcattccaaatgaaccag
atgaataatgctaactctcaacaaaaaggtcaattcttggcacaaaatgttgttaaccca
cctcaattcttgaatcagaatgttggttttggtggtttccccaatccaatgcaaaatatt
aatcagcttctacaattgcaaatggctatgcaaatggcaagttatgctcaggttgttcct
gggagcgttcccatgtatccaaaccaggtgtcgcagggtatgggaattcaaaattctaac
attgctatgaatgggcatttgggtcgtgcgaatggcggtggaaatgtccagcagccaatg
aatgggaatttttctaaacaaatgggtaatgtgagtcagcagtcgccattgatgaactct
tttggcgttgttcaacagccacaaactcagaacttcaatgctcatgcttctgctaattca
caggtttctcaaggtatgggccctccaagttccaactttggaatgaatgcacacttgggt
cttgtaaatggaaatgtagccgtccaacagtctaacaatggcttgtctaagcaaatgcct
aatgtgactcagcaaatgcagggccagttgcctctgatgaatccattcggctttgtgcag
cagccacaaactcagaacttcaatgctgcttcttctgctaacacacaggtgtgtcagggt
gtggggcctcaaatttccaactttggtatgaatgcgcatttgggtcttttgaatgtcaat
ggagctgtccagcacatgcctaatgtgaatcagcaattactaggccagttacctctgatg
aatccttttgactttgttcagcagccacaaaatcagaacttcaatgctgttgcttctact
aatacacaggcaaatcctggacgtgttgttgggcttaaccaatcaaaaggcaaccagcaa
aattcttacaatagcaacttctgtgggaatcataagaattcaaagtttggtaaagggaag
ttctcaaatcatgataaaagccatgaaaaaggtcatcagagaaatggggagaaaaaagtt
gatcttgctaattcagtgaaacctgagaagcagaaaaagagatctctcgtagtgacttat
tcagcacaagaaatccgacggtggcgggaagaacgccgtaagaattacccttcaaaagca
aacattgagaagcacctgacggagaaaatggtagagtccgaggatagttcgtgtgctgtc
aagttgcgccgtcagcaacttaaggaaattctggccaagcaggctgagttaggctgtgaa
gttgcagaaataccaccatcctatctgtcggatactgagaaacaagcggatggaagggat
cgaacaaggccactgagtagaaaagagaggttccaaaaaaggttcaataaaagagaaaag
ttcaatagaaatgatcgcttctccaagaaacgaagatttggaaactccgattcatcaaat
acttgtgatcaaaagggttttcctgcaggaaaatggaatgtgaaccgtgattctgtaact
caggttacaaaaaatgcaagagaaccaactctactacagaaattattgagttcagatatt
cgaagggataaacgccgcctattgcaagtctttaggttcatgaccatgaattctttcttt
aaagattgtccagagaaacccctgaggtttcctcaagtgttacttaaagaaacaggggag
gaaattgaagctgctgaagaaatatatgatgctatcgatgcaaccattgaaaaatcatca
gatggctgcaacagtgacaatgaagataatattgctgaaattaaagaagcagttagtgag
ttacaagaaaatggtaacaatgaaagtgaagaacctcaaggagagacagatcactga
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