Lycium barbarum (goji berry): 132645366
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Entry
132645366 CDS
T09483
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132645366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132645366
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132645366
Enzymes [BR:
lbb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
132645366
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132645366
Chaperones and folding catalysts [BR:
lbb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132645366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
132645366
NCBI-ProteinID:
XP_060218303
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All DBs
Position
6:complement(108845260..108853107)
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AA seq
187 aa
AA seq
DB search
MASGGGVVEWHLRPQVPKNPVVFFDVTIGNIPAGRIKMELFADITPKTAENFRQLCTGEF
RKAGVPQGFKNCQFHRVIKDFMIQGGDFLKGDGSGCVSIYGSKFDDENFIAKHTGPGLLS
MANSGPNTNGCQFFLTCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAVGANNKPKLACV
IAECGEM
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcggcggggtggtagagtggcatctaagaccacaagtaccaaagaaccct
gttgtcttttttgacgtaactatcggcaacatccctgctggtcgcatcaagatggagctt
ttcgccgatatcactcccaaaactgctgaaaatttcaggcaactatgcacaggagagttc
aggaaagcaggagtgccacaaggtttcaagaattgtcagttccatagggtgattaaagac
ttcatgatccaaggtggtgatttcctaaagggagatggtagtggatgtgtttccatatat
ggaagcaagtttgatgatgaaaactttatcgccaagcacactggtcctggcctattatca
atggcaaatagcggaccaaacactaatggatgtcagtttttcctcacatgtgcaaagtgc
gactggcttgacaacaagcatgttgtttttgggcgtgttcttggagatggtcttttagtg
atgaggaagattgagaatgtggctgttggagctaacaacaaaccaaagctggcatgcgtg
attgctgagtgtggggagatgtaa
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