Lycium barbarum (goji berry): 132645430
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Entry
132645430 CDS
T09483
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132645430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132645430
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
132645430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
132645430
NCBI-ProteinID:
XP_060218389
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Position
6:110024422..110028801
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AA seq
667 aa
AA seq
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MEAEEKMVVVGLIDKATNSTRPEVEPRLLKSIKLAVRSSDSELRLSAHTLMSLMKRDHSQ
VRYLALLIIDELFMRSKLFRTIVVENLDQLLTLSVGFRRNLPLPPPTSVASVLRPKAIEF
LEKWNSSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIRQERREREMRTKEILLKKFE
TLKENLASIKDEIQSTVDEIGECLNILSTKDEEDILLTPLDDEEIVEFRNSELRQIRLDS
LKEGEKIKEDSENEVVFDALRELFKVLVTKHMVTMQEWISVLIRVEAADTRFRDSTLKDF
IDIRNHLKSVKKKCEESGCTLPKTRIVEEEDIWEEGNVEPETGKSFKMPDRGEDCSLNLN
FSGMRVEAPKCSNLKVKGKEKSQVANGGSATDTSRGKLLAEAPVMKWGSFLDDWGSNSRD
VLANQRGLDLDGHWGRVDHDAVIPAEKIAELKVHATVYREDPVEIQPCRAPLRSGGLCQR
KDLKICPFHGPIIPRDDEGKPIDTDSSIEDQAAQLVEQQEPINACPSVVEKIHDLDEKLV
GKLAKQAVKNVRQRDKEETKKREHDKQILKRAKLAKVREHNQEVLRDAALASSSRSLYAG
EDQDRSSLSRSLSTSKKETLASMLKKKETAKDRLGQRLLNSRARDATVRQLTVAEDANYR
EAFPNQW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaagagaagatggtggttgtggggttaatagataaggccaccaactccacc
agacccgaagtggagccccgactcctcaaatccatcaaattggctgttcggtcctctgat
tcggagctccgactttctgcccatacccttatgtcccttatgaaacgtgaccactctcag
gtacgatatcttgctcttctcataatagatgaactcttcatgcgctcgaaactttttaga
actattgttgtcgagaacttggatcagttgctcactttaagtgttgggttcagaaggaat
ctgccacttccgcctcctacctctgttgcttctgtattacgccccaaagcaattgagttc
ttagagaagtggaattcttcatttggcattcattatagacagctcaggttggggtatgac
tatttgaagaacaccctccggtttcaatttccaaacttgcaagcaaatgcagctaggatt
cggcaggaaaggagggaaagagagatgaggacaaaggagatcctgctgaagaagtttgaa
accttgaaggagaaccttgcttctataaaagatgaaattcagtccacagttgatgaaatt
ggcgagtgtttgaacattttaagcacaaaggatgaagaagatatattgctgactccttta
gacgatgaagaaattgtggagttccgcaactctgaactccgacaaatccgtcttgattct
ttgaaggagggggaaaaaattaaagaggacagtgaaaatgaagttgtgtttgatgcattg
agggaactatttaaggttctagtaacaaaacatatggtcacaatgcaagaatggatctct
gttctcataagagtggaagcagcagacaccaggttcagggactccacattaaaggatttt
attgatattcgtaatcatctaaaatcagtgaagaaaaaatgtgaagaatctggttgtact
ctgcctaaaactagaattgtcgaggaagaagacatatgggaagagggtaatgtggaacca
gaaactggaaaatcatttaaaatgcctgaccgaggtgaggattgttccttgaatctgaat
ttcagtggaatgagagttgaagctcctaaatgtagtaatcttaaagtaaagggaaaggaa
aagtcgcaggtggccaatggtggcagtgcaactgacacctctagaggtaagcttttagct
gaagctcccgttatgaagtggggttctttcttggatgattggggatcaaacagcagggat
gttttggcgaaccaaagaggattagatcttgatggccattggggtagggtggatcatgat
gcggtgattcctgctgaaaaaattgcagaattgaaagtccatgcaactgtatatagggaa
gatcctgttgaaatccaaccatgtcgggcccctttgagaagcggaggactttgtcagagg
aaagatttgaaaatttgtccatttcatgggcctattattcctcgagatgatgaaggcaaa
ccaattgatacagactcatcaatagaagatcaggctgcccagttggtggagcaacaagag
cccatcaatgcatgcccttcagtagtggagaaaatacatgatttggatgagaaacttgtg
ggaaaattagccaaacaggctgtaaaaaatgtccgacaaagagacaaagaggagacaaag
aagagagagcatgacaaacagattttgaagcgggccaagcttgcaaaagtccgagaacat
aatcaagaagttctacgtgatgctgcattggcatcatcatcaagatccttatatgccgga
gaagatcaggatagatcttctttgtctagatctttgtccacgagtaagaaagaaactctg
gcatctatgttaaaaaagaaagaaactgccaaagatagattgggtcaaaggcttcttaac
agccgtgctagagatgcaacagtacgacagttaacggtggctgaggatgctaattaccgt
gaagcctttccaaatcaatggtag
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