Lycium barbarum (goji berry): 132645553
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Entry
132645553 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132645553 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132645553
Membrane trafficking [BR:
lbb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
132645553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
132645553
NCBI-ProteinID:
XP_060218559
LinkDB
All DBs
Position
6:complement(112440988..112454478)
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AA seq
1139 aa
AA seq
DB search
MYMAYGWPQVIPMESGLCPSSQHIVYLKLINRLLLVVSPTHLELWSSSQHRVRLGKYKRS
SDSIHKEGENLRAVWSPDTKLIAVLTSSFYLHILKVQFTERKIQIGGKQPTGLFLASITL
LLNEQVPFANSNLTMSNVVCDNKHMIVGLSDGSLYNISWKGEFCGAFDAFDLDAQPRDGS
GLPKLASSLENGVASGESLSFSKSSHHSSKNSAVIHLEFSLPVRLLVVLFSDGQLVLCSV
SKKGLKQMESIKAEKRLGSGDAVCAAVASDQQLLAVGTRRGVVELYDIAESASLMRSVSL
YDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSASSPV
VKRNQECKYEPMMSGTSLMNWDEYGYRLYAIEEGSSERIIAFSFGKCCLNRGVSGTTYVR
QVIYGEDRLLVVQSEDTDELKILHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGLIL
YDIRLKKWRVFGDVTQEQKIQCRGLLWLGKIVVVCNYDDSSDGYELLFYPRYHLDQSSLL
CRKPLLTKPMAMDVYQDYLLVTYRPFDVHIYHVKLSGELTPSSSPDLQLSTVRELSIMTA
KSHPASMRFIPDQLPRESVAGNGRLSTSFDLSVREPTRCLILRTNGELSLLDLDEGRERE
LTDSVELFWVTCGQSEEKTSLIEEVSWLDYGHRGMQVWYPSPGADAFKQEDFLQLDPELE
FDREVYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKKEE
ALRLAQLSAEKPHFSHCLEWLLFTVFEADISGSRNQSVISNQSTNSSLLDKTCDLIRNFP
EYFDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVS
QYCALRLLQVITCRCKECWLVVHATLDESLYELAGELVRFLLRSGREYEPTTTDSEKLSP
RFFGYFLFPSSYRRQTLDSKGSFKEQSAHVASVKNILESHASYLMSGKELSKLVAFVKGT
QFDLVEYLQRERYGSARLDNFASGLELIGQKLQMETLQSRLDAEFLLSHMCSVKFKEWIV
VLATLLRRAEVLFDLFHHDMRLWKAYSITLKTHPSFVQYHDLLESLEEKLSSTSNSDET
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggccacaggtgatccctatggaatcagggctatgcccttct
tctcagcacattgtgtacctcaaactcatcaatcgcttattacttgtcgtttctcccact
catcttgagctctggtcctcttcacagcatagagtgagattgggcaagtacaagagaagc
tcggattcgattcacaaggaaggcgagaatttgcgtgctgtttggagtcctgataccaaa
ttgattgccgttcttacatcttccttctatctacacattttgaaggtccaatttacagaa
aggaaaatacaaattggaggcaaacaaccgactggtttgtttctagcaagcataactttg
ctcttgaatgaacaggtgccttttgctaacagtaacttgacaatgagcaatgtagtttgt
gacaacaaacatatgatagttgggctttctgatggatctctgtataatatatcctggaag
ggagagttttgcggggcctttgatgcctttgatcttgatgctcagcctcgtgatggcagt
gggcttcctaaactagcaagttctttggaaaatggtgttgcttctggcgagagtttatct
ttttctaaatccagtcatcattcgtcaaaaaactcagctgtgatccacttggagttctcc
ttacccgtaaggttgcttgttgtgctattttctgatggacaactggtcttatgttctgtg
agcaaaaagggtctgaagcaaatggagtctatcaaagctgaaaagagactgggttctggt
gatgctgtatgcgctgcagttgcttcagatcaacaacttcttgcagttggtaccagaaga
ggcgttgttgagttgtatgacattgcagaatctgcttcgcttatgcgttctgtttctctg
tatgattggggatattcagtggaggatactggtgctgtcagttgtgttgcatggacacct
gataattctgcttttgcagttgggtggaagttaagagggttaacagtttggtctgtttct
ggttgtcgtttgatgtccacaattcgtcaaattggcttaagttctgcgtcttctccagtg
gtcaagcgaaatcaggaatgtaaatatgaacctatgatgagtggtacctcgttgatgaac
tgggatgaatatggatacaggctttatgctattgaggaaggatcttcagagaggattatt
gcattctcttttggaaagtgctgtctgaacagaggagtctccgggactacttatgtccga
caagtaatctatggtgaagatcggttgcttgttgtgcagtcagaagatactgatgaacta
aaaatcttgcatcttagcctcccagtttcctacatctctcagaattggccagttcaacat
gtggctgctagcaaggatggaatgtacttagcagctgctggccttcatggactgatcttg
tatgacatacgattgaaaaagtggcgagtttttggagatgtcactcaggaacagaagatc
cagtgcagaggcttgttatggcttgggaagattgttgttgtctgcaactatgatgattct
tctgacgggtatgaattgcttttctatcccagatatcaccttgatcagagttcactacta
tgtcggaaacctttgcttaccaaaccgatggccatggatgtttaccaagattatcttctt
gttacttatcgaccttttgatgtccatatttatcatgtgaagttatctggtgaactaacg
ccttcgagttctcccgatttacagctttctacagtacgagagctatcaatcatgactgca
aagagccatcctgcttcaatgcgttttattcctgatcagctcccaagagaaagcgttgca
ggaaatggtcgcctgtcaacttctttcgatctgtcagtccgagagcctacccgatgctta
atactaaggacaaatggagagctttcacttcttgatttggatgaggggagagaaagagaa
ctcacagactctgtagagttgttttgggttacctgtggtcagtcagaggagaaaacaagc
ttgattgaggaagtttcatggttagactatggccaccgaggaatgcaggtttggtatcca
tctcccggtgctgatgcttttaagcaagaggattttttgcagttggatccggagctggaa
tttgatcgtgaggtgtatcctcttggtttgctgccaaatgctggagttgtagttggtgtc
tcccagagaatgtcattttccgcatgcacagagtttccatgttttgagccatctcctcaa
gctcagactattctgcattgcctacttcgacatcttctacagagggataaaaaggaagaa
gctctaagattggcacaattatcagcagagaagccacatttttcgcactgcttagagtgg
cttctttttaccgtgtttgaagccgacatttctgggagcaggaatcagagtgttatttcg
aaccagtcaacaaattcctcacttctggataagacatgtgatttgattagaaattttcca
gagtactttgacgtggttgttagtgttgcaagaaagactgatggccggcattgggcagat
ttatttgctgctgctgggagatcaactgagctatttgaagaatgctttcaaaggagatgg
tatcgaaccgccgcttgctatatactagtaattgctaagcttgaaggtccagctgtaagt
cagtactgtgcattgcgtttgttgcaggtaatcacgtgcagatgtaaagaatgttggctc
gttgtccatgcaacattggatgagtctttatatgaattggcaggggaactggtgaggttt
cttctcagatctggacgggaatatgaacccacaaccactgattctgagaagctatctcct
agattctttggatattttctgtttccttcgagttaccggaggcaaactttggattccaaa
ggttcatttaaggagcagagtgcacatgttgcttctgtgaagaatattttagaaagtcat
gcaagctatttaatgtctggaaaagaactgtcaaagcttgtcgcatttgtgaagggcacg
cagtttgatctcgtggaatatttgcagcgagaaagatatggaagtgctcgtttggacaat
tttgcttcagggcttgaacttattgggcagaagcttcagatggaaacattgcaaagtcgt
ttagatgcagagttccttttgtctcatatgtgctctgtgaagttcaaagagtggattgta
gtattggccacacttttgaggcgggctgaggtcttgtttgatttatttcatcatgatatg
cgcttgtggaaagcatatagcattactttaaagacccatccatcatttgtccaataccat
gacttgcttgaaagtttggaagaaaagctttcatccacttcaaattcagacgagacatga
DBGET
integrated database retrieval system
