Lycium barbarum (goji berry): 132645645
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Entry
132645645 CDS
T09483
Name
(RefSeq) phospholipase D gamma 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00564
Glycerophospholipid metabolism
lbb00565
Ether lipid metabolism
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
132645645
00565 Ether lipid metabolism
132645645
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132645645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132645645
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
132645645
Membrane trafficking [BR:
lbb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
132645645
Endosome - Golgi transport
Others
Others
132645645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
132645645
NCBI-ProteinID:
XP_060218728
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Position
6:114478057..114490566
Genome browser
AA seq
1125 aa
AA seq
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MDNYNNSSYPYPYNTGYGYPPPPNSNQPYPPPPGSGAYPPPGPGDAYPQYPPHQSPQYPP
PYNTQHSGHYNYQPYPPVPSAPSAPPAPTLHHSSSLDYGYPPPSHGPYPSHAYPPPPTSS
STVPTPEHQGSFGYAAAPPQHYQHSWPVRPLESQSSNSLHRQDSASSFSSDSSARPSAYP
PIHDLVANMNLSDNNPSAPASPPAPATYHPGPNPVPYGHPNSFSRWESESPKPTYPTPCA
EPQSNNQAMQVVPFSPSKSSLKVLLLHGNLDIWVYEAKDLPNMDMFHKTIGDMFGQMSNK
ITSDPYVSITVADAVIGRTYVIGNNENPVWMQHFNVPVAHYAAEVQFLVKDDDIVGSQLM
GTVAVPLEQIYGGGKVEGFFPILNSSGRPCKAGAVLRISVQYYPMDKLSIYHHGVGAGPE
YYGVPGTYFPLRMGGTVTLYQDAHVPDGCLPNLMLDYGMPYVHGKCWRDIFDAIRQARRL
IYITGWSVWHKVKLVRDDASVDGSTLGDLLKSKSQEGVRVLLLIWDDPTSRSILGYKTDG
VMATHDEETRRFFKHSSVKVLLCPRVAGKRHSWVKQREVGVIYTHHQKTVIVDADAGNNR
RKIMAFVGGLDLCDGRYDTPEHPLFRSLKTVHSEDYHNPTYAGSTAGCPREPWHDLHSKI
DGPAAYDVLTNFEERWLKASKPQGIKKLKTSYDDDLLRIERMPEILGISEAPSVSGDDPN
GWHVQIFRSIDSNSVKGFPKDPKEATMKNLMCGKNVLIDMSIHTAYVKAIRAAQHFIYIE
NQYFIGSSYNWSQHKDVVQVAKVEGLVTWVTGSSPAPCELSLVFKWRRVQGWAHYPEFRR
LRLVLRVVPGQISRHKKGANNLIPMELALKIAEKIRAHERFAAYIVVPMWPEGNPTGAAT
QRILYWQNKTMQMMYETIYKALEEVGLENSYSPEDYLNFFCLGNREAGKVENESPGTANT
PQAFSRKHRRFMIYVHSKGMIVDDEYVILGSANINQRSLEGTRDTEIAMGAYQPHHTCAR
KQSSPYGQIHGYRMSLWAEHLGVVEDCFRQPESLECVRRVRSMGEYNWKQFAADEVTEMR
GHLLKYPVKVDRKGKVKNLPGCTNFPDVGGNIIGSFLAIQENLTI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacaattataacaattcttcatatccatatccatataacactggttatggttaccct
ccaccacctaattcaaatcaaccatacccccctccaccaggttctggtgcatatcctcca
ccaggtcctggtgatgcataccctcaatatcctcctcatcaatcccctcaatatcctccc
ccttacaacactcaacattctggtcattataactatcaaccctatccaccagttccatca
gctccatcggcaccaccagcaccgactctccaccattccagctctttagactatgggtac
cctccaccatcacacggtccctatccatcccatgcatatccgcctcccccgacatcttct
agtactgtccctactcctgaacatcaaggcagttttggatatgctgctgcacctcctcag
cattatcaacattcctggccagtaaggcctttggagagccaatcatccaactctctccat
cgccaagatagtgcttcgtcgtttagtagtgactcttccgctcgcccttcagcttatcca
ccaatccatgatctcgtagcgaacatgaatttgtctgataataacccttctgcaccggct
tctcctcctgcccctgcaacttatcacccggggccaaatcctgttccctatgggcaccct
aattccttttcaaggtgggaatcggagtctccaaaaccaacctatccaactccttgtgct
gaaccacagagtaataatcaggctatgcaggttgtgccattctcgccttctaaaagctcc
ttaaaggttttgctcttacacggaaatctggatatttgggtatacgaagcaaaagatctg
ccaaacatggacatgttccacaagaccattggggatatgtttgggcaaatgagtaataag
atcacaagtgatccttacgtctcaattactgtagctgatgcagtgattggccggacttat
gtcataggcaataatgaaaatcccgtgtggatgcaacattttaatgtccccgtagcacac
tatgctgcggaagtacagtttcttgtcaaggacgatgatatagtaggttctcagcttatg
gggacagtggctgtcccgctagaacagatatatggagggggtaaagtagaggggttcttt
ccgattttgaacagtagtggaagaccttgcaaggctggagcagttttgaggatatcagtc
caatattatccaatggataaattaagtatttaccatcatggagttggtgctggtcctgag
tattatggggttcctggaacttattttccactgaggatgggtggaacagttactctgtat
caagatgctcatgtgcctgatggatgccttccaaatttgatgcttgactacggaatgcca
tatgtacatggaaagtgctggcgtgacatctttgatgccatacgccaagcccgacgcttg
atctacattacaggttggtcagtgtggcacaaagtcaaacttgttcgagatgatgcttct
gttgatggttccactctaggggatcttttaaagtcaaagtcacaagaaggtgttagagtg
ctgcttctaatatgggatgaccctacatcaagaagcatccttggctataaaacggatggt
gttatggcaacccatgatgaagagactcgtaggtttttcaaacattcttccgtgaaagtg
ctgctttgtcctcgagtggcagggaaacgtcacagttgggtcaagcagagggaagttgga
gtaatttatacacatcatcagaaaactgtgatagtggatgccgatgctggcaacaatcga
agaaaaatcatggcatttgttggaggacttgacttgtgtgacgggcgatatgatactccg
gagcatcctctatttcgatcactgaagacagtgcactctgaggactatcataaccctact
tatgctgggagtacagctggttgtccaagagagccgtggcatgacttgcactctaaaatt
gatggtccagcagcatatgatgttctcacaaactttgaggagcgctggttgaaggcttca
aagcctcaaggcattaagaagttgaagacgtcatatgatgatgatttgctccgaattgaa
agaatgcctgaaattcttggtatttctgaggctccatctgtgagcggtgatgaccctaac
ggttggcatgtacagatatttcgttcgatcgactcaaactcggtcaaaggctttccaaag
gatcctaaagaagctacaatgaagaacctaatgtgtgggaaaaatgtacttattgatatg
agcatacacacagcatatgtgaaggcgattcgtgctgcacaacacttcatttacattgaa
aatcaatatttcattggctcctcgtacaattggagtcaacataaagatgttgttcaagtg
gcaaaggttgagggacttgtgacttgggtcactggttcgagccctgcgccatgtgaacta
agcctggtatttaaatggagaagggtacaggggtgggcccattaccctgagtttcgaagg
ctgcggttggtcctaagagttgtccccggacagatttctcgtcataaaaaaggtgcaaat
aatctaattcccatggaacttgcacttaaaatagctgaaaagataagagcgcatgagagg
tttgcagcatacattgtcgtccctatgtggccagagggtaatccaactggggctgctaca
cagagaattctttattggcagaacaagacaatgcaaatgatgtatgaaactatttacaag
gctttagaggaggttgggcttgagaattcatactctccagaagattatttaaacttcttc
tgtcttggtaaccgtgaggctggtaaggttgaaaatgagagtccaggcactgcaaacact
cctcaggcgttcagtcgaaaacaccgtagattcatgatttatgttcattctaaaggcatg
attgtggatgatgagtatgtgatattgggatctgcaaacatcaaccagcgctctctggag
ggtactagagacaccgagatcgcaatgggagcatatcaacctcatcatacatgtgcaaga
aaacagtcaagcccatatggacagattcatggatatagaatgtctctgtgggctgagcat
cttggagttgttgaggattgcttcagacagccggagtcgttagaatgtgtaagacgagtt
aggtccatgggagaatataactggaagcaattcgcagctgatgaagtaacagaaatgaga
gggcacctcttaaaatacccagttaaagtcgatcgcaaaggcaaggtgaagaatcttccg
ggatgtacaaatttcccagatgttggtggaaacataataggatcattcttagcaattcaa
gaaaatcttaccatttga
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