Lycium barbarum (goji berry): 132645700
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Entry
132645700 CDS
T09483
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132645700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132645700
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
132645700
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
132645700
NCBI-ProteinID:
XP_060218825
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Position
6:115575372..115581370
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AA seq
710 aa
AA seq
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MARNKEAVVLVIDVGPSMHSVLPEIEKVCSLLIQKKLVFSRYDEVGFVLFGTSDTKNELT
EEIGGYEHVTVLRNIKVVDDDLVDALQNLPRGSFPGDFLDAIVVGMDMLIKKFGQTNKGK
KRLCLITNAATPIKDPFEGTKEDQVNTITTQMTAQGMKMDCVIVRMKQDWENRRVMEEND
FLMSVFSNKSSSKVVYVESPTSLLGALRTRNISPVTIFRGDFEISTQLKIKVWVYKKTSE
EKFPTLKKYSDKAPLTDKFATHEIKVDYEYKSIEDPNKVVPPEERIKGFRYGPQVVPISP
AELEAVKFKPEKSVKLLGFTDASNIMRHYYLKDVNIFIAEPGNKKAILALSALARAMKEM
NKVAIVRCVWRQGQANVVVGVLTPNVSDKDNTPDSFYFNILPFAEDVREFQFPSFSNLPS
SMQPNEKQQEAADKLVQMLDLAPPGKQELLPPDFTPNPVLERYYRYLDLKSKDPDAAVPP
LDETLRKITEPDVELLSQNKSIIEELHRYFELKENPKLKKSTRRIMKGRPSGSDEEKEEF
DKGADAKAIDSTEYSSKTKVEKIGDVNPVKDFEEMMSRRDNPKWINKAIQDMKNRIFDLV
ENSCEGDTYNKALECLVALRKGCILEQEPKQFNDFLCHLCKFCQEKDLRSFCQYLTSHEI
TLITKSEAPDSDIPEHEARSFMVKPELDSENVKSEAKEENDIMSIYLGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaataaggaagcggtagtgttggtgattgatgtgggtccttcaatgcactca
gttttacctgagattgaaaaagtttgttcattgttgatacagaagaagctggttttcagc
agatatgatgaagtggggtttgtcttatttggaacttcagataccaagaacgaattgaca
gaggaaataggtgggtatgaacacgtgacagttctgcgaaatatcaaagtcgtagatgat
gatcttgttgatgctctacaaaaccttccacgaggaagttttcctggagattttcttgat
gcgattgttgttggaatggacatgctgattaaaaagtttggacaaaccaacaagggaaag
aaacgtctttgccttattacaaatgctgctactcccatcaaagatccatttgaaggaaca
aaggaagatcaagtgaacaccattactacacagatgacagcacaaggcatgaagatggac
tgtgtaattgttagaatgaaacaagattgggaaaataggagagttatggaagaaaatgat
tttctaatgtcagtattctcgaataaatcttcctcaaaagtagtatacgtggaaagtcca
acttctttgttaggtgcacttagaactcgtaatatatcgccggtcacgatattcagaggt
gattttgaaattagcacacaattgaagatcaaggtatgggtttacaagaaaacatctgaa
gagaagttccccaccctgaaaaagtactctgataaggctcctctcacagataaatttgcc
actcacgaaatcaaggttgattacgaatataaaagcatagaagaccctaataaagttgtg
ccaccagaagagaggattaaaggttttcggtatggacctcaagtagttcctatatcccct
gctgagttggaggctgtaaagttcaaaccagagaaaagtgtgaagctactaggattcact
gatgcttcaaatataatgcggcattactacctgaaagatgtaaatatcttcatagccgaa
cctggcaacaaaaaggccatccttgcactttctgctttggcgagggcaatgaaggaaatg
aacaaagtagcaattgtccgatgcgtatggaggcaaggacaggctaatgttgttgttggg
gtcctaacaccaaatgtctctgacaaggataatactcctgattcattttacttcaatatt
cttccctttgcggaggatgttcgggagtttcagtttccttctttcagcaatctgccttca
tcaatgcagccaaatgaaaagcaacaagaggcagcagataaattggttcagatgttggat
cttgcaccgcctggaaaacaggaattgttgccacctgactttacaccgaatcctgttctg
gagcgttactaccgctatcttgacttgaagtcaaaggacccagatgctgctgttcctcca
cttgatgaaaccctcagaaagataacagaacctgatgttgaacttctttctcaaaacaag
tccatcatagaggaactccataggtattttgaactaaaagagaatcctaagctgaaaaaa
tcaactagaagaattatgaaaggtagaccttcgggatcagatgaggaaaaagaagagttc
gacaaaggtgctgatgccaaagctattgactccactgagtactcatccaaaacgaaagtt
gagaaaattggagatgtaaatcctgttaaagactttgaggagatgatgtctcgaagggat
aatccaaaatggattaataaggccattcaggatatgaaaaataggatctttgatcttgtg
gagaattcttgtgaaggggatacgtataataaagcattggaatgtttggtggcgctacgc
aaaggttgcatccttgagcaggaaccaaagcagttcaatgatttcctgtgccacctgtgt
aaattctgccaagaaaaagacctgagaagtttttgtcaatatctcacatctcatgaaatc
actttgataaccaagtcagaagctccagacagtgatattccagaacacgaggccagaagc
tttatggtcaagcctgaacttgactccgaaaatgtgaaatcagaggctaaagaagagaat
gatattatgagtatatacctgggtggaaagtag
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