Lycium barbarum (goji berry): 132645764
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Entry
132645764 CDS
T09483
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132645764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132645764
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132645764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
Motif
Other DBs
NCBI-GeneID:
132645764
NCBI-ProteinID:
XP_060218932
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All DBs
Position
6:complement(117027943..117037742)
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AA seq
672 aa
AA seq
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MSTGFSFSNSSSSSTPPTSSTSPFSFGFANPNPNPASSAPSSTPPTSSTSAFSFGFANPN
PNPNPASSAPPSTPTTSSTSAFSFGFANPNPNPASSAPSFGSAASASTPTPTLFGSSSGT
ATTTSNLFGSSSGSGTTSSIFGTSTSTTNLFGSTTSASSSPLFGAPNSAGGSSTPASGFF
DFTSGGLFGSLSGTAATSATTSPFASTTPPFGSFFSAPSSSQGFSFSSSASSAPGFSPAT
ASAFSFSTLSSAASSPALSTPSSAAPAVSLSTPTSSAAPTFSFSMPATAPSSSPSLSHSV
AKGTGSSSVTTSSNAPSFASNTSSAAASSNAPSFAFNTSSAAASSSAPVSKPASSTGFSI
ASSPLFSTVTTTTNVSTATTSGTGSAPTFSVPTSSASTTSAVASSASSTPALSSQSTAAL
PSFGVPSTTSGAATSSAAQTSSALTVTSSSGTTSTSTVAATSTPKLPSEITGKSVEEIIK
EWNTELQERTAKFRKQANAIAEWDKRILQNRDILLKLESEVAKVVETQGSLERQLELIET
HQEEVDKALQSMEEEADRIYKDERGVILDDEAASTRDAMYEQAEFVEREMEKMTEQIKSI
INTVNASQGGELEATDGMTPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLASEGSAVN
RELTGPRLWLTR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgggcttctcattctccaattcttcttcttcctctacccctcctacatcctcc
acatccccattctcctttggcttcgcaaaccctaaccctaaccccgcctcatctgctcct
tcctctacccctcctacatcctccacatccgccttctcctttggctttgcaaaccctaac
cctaaccctaaccccgcctcatctgctcctccctctacccctactacatcctccacatcc
gcattctcctttggcttcgcaaaccctaaccctaaccccgcctcatctgctccgtcgttt
gggtctgctgcttctgcttccactcccacacccaccctattcggatcttcttccggtacg
gccaccaccacttcaaacttattcggatcatcttccggttcgggcaccacttcaagcata
ttcggaacttctacctccactacgaacctcttcggatccactacatctgcaagtagttcc
ccattgtttggggcaccaaattcagctggtggttcttctactccagcttcgggttttttt
gatttcacttcggggggcttgtttggttcattatctggaactgcagcaactagtgctact
actagtccttttgcttcaacaactcctccatttggttcattcttctccgctccttcttct
tcacagggattttcgttctccagctcagcatcttctgcaccgggtttttcacctgctact
gcatcagcattttcattttcgaccttgagctcagcagcatcaagtccagcattatcaact
ccgagttcagctgcacctgcagtgtcattatcaacgccgacttcttcagcagcacctaca
ttttccttttccatgcctgctactgcaccttcttcatctccatcactgtcacattcggtt
gcaaaagggacaggaagttcctctgtaacgacttcttcaaatgctccttcgtttgcatct
aatacatcttcagctgctgcttcttcaaatgctccttcgtttgcgtttaatacatcttca
gctgctgcttcttcaagtgctccggtgtcaaaacctgcttcaagtactggtttttcaatt
gcttcatcgcctttgttttccaccgttaccaccaccaccaacgtttctacagctacaact
agtgggactggttcagctccgacgttttccgtgcccacatcttcagcttcaacaactagt
gctgttgcttcatccgcaagttctacaccagctttatcctcacaatctactgcggctctg
ccaagctttggtgtaccaagcacaacttctggcgctgcaacaagttcagctgctcaaaca
tcatctgcattgactgtaacttctagtagcgggactacttcaacttctactgtagctgcc
acttccacaccaaaattaccatcagaaattacaggaaagtctgtagaagagatcatcaag
gaatggaacactgagctgcaggaacgcactgcaaaatttagaaagcaggctaatgcaata
gctgagtgggataaaaggatcttgcagaaccgtgatattcttctcaaacttgagagtgaa
gttgcaaaggttgtcgagacacaagggagcttagagcgacagctggagctaattgagact
catcaggaagaggttgacaaggcattgcaaagcatggaagaagaagctgatcgaatttac
aaagatgaaagaggagtgattcttgatgatgaagctgcatcaacaagggatgctatgtat
gaacaggccgagtttgtggagagggagatggagaagatgacagagcagatcaagtcaatc
attaatactgtcaatgccagccagggtggagaacttgaggcaacagatggaatgacaccg
cttgatgttgttgtccgaatcttgaacaatcaattgagttcactgatgtggattgatgaa
aaggctgaagaattctcatctcgtattcagaagcttgcaagcgaagggtctgccgtcaat
cgtgaattaacaggccccagattatggttgactcgatga
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