Entry |
|
Name |
(RefSeq) E3 ubiquitin-protein ligase ATL4
|
KO |
|
Organism |
lbb Lycium barbarum (goji berry)
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Brite |
KEGG Orthology (KO) [BR:lbb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:lbb04121]
132645842
Enzymes [BR:lbb01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132645842
Ubiquitin system [BR:lbb04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
132645842
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
6:118648356..118649981
|
AA seq |
359 aa
MSGYFPQPPPLPMPFTATVNGGATSIPQPVDNTAIINDNPPPSPSPSSSSSSSFIIVIIV
IASAIIVSATIYLILRLLSRRFHRSFRTYAAADDVVSHSAAATAVNGNRCLENQRSTEDE
KLLDSLPLFKFGSVTGNLTGVDCAVCLSKFEPDDQLRLLPLCCHAFHSSCIDAWLVTNQT
CPLCRSTVYPTDEDVLSKVVLASENNELQRNGSFRIEIGSISRRRGGGSDSVSNQRSYSV
GSFDYIVDDGYEVSVNSIHRRGVSESTDKESSIGVAVPAPPGESIASDISGGGGRSWLRD
YVDRIGSFSLSSRSTSFRSSGRFFNASSRRSDTVVPIDDLEAGRIGEEISELFRWLSGV |
NT seq |
1080 nt +upstreamnt +downstreamnt
atgtccggctattttcctcagcctccaccactcccaatgcccttcaccgccactgtcaac
ggcggagctacttccattcctcagcctgttgataatactgccattatcaatgataatcct
cctccatcaccatctccatcttcatcttcatcttcttccttcattatagttatcatcgtt
attgcttctgctattatcgtttccgctactatatacctcatccttcgcctcctctcacgg
cggttccaccgctctttccgtacatacgccgccgctgacgacgtcgtgtcacattccgct
gctgctacggctgttaacggaaaccgttgcttagagaaccaaaggagtaccgaagatgag
aagttgcttgattcgttaccgctttttaagttcggttcagttactggtaacttaactggt
gttgactgtgccgtttgcttatcaaaattcgaaccggacgatcagttgagactacttccg
ttatgttgtcacgcgtttcatagcagttgtatagacgcgtggcttgtaacgaaccagact
tgtccgctttgcaggtctactgtataccctacagacgaagacgtgttaagtaaagtagta
ttagcttcagaaaataatgagctgcagcgtaatggtagttttcgtattgaaatcggtagt
ataagtcgccgacgtggcggtggttcagattccgtcagtaatcagagatcatattctgtg
ggctcatttgattacattgtggatgacggttacgaagtttcagttaactctattcatcgg
agaggtgtttctgaatctactgataaggaatcatcgattggtgttgctgtaccggcgcca
cctggtgagagtatagcttctgatatttctggtggtggtggacggagttggctaagggat
tatgttgatagaattggttcgttttctctatcgtctcgatcaacgtcctttcgaagctct
ggtaggtttttcaacgcaagtagccgacggagcgatactgttgttcctattgatgatttg
gaagctggtcggattggggaagagattagtgaattgtttcgatggctttcaggggtatga |