KEGG   Lycium barbarum (goji berry): 132645842
Entry
132645842         CDS       T09483                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lbb04121]
    132645842
Enzymes [BR:lbb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132645842
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    132645842
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-C3HC4_2 zf-RING_5 Prok-RING_1 zf-RING_UBOX zf-C3HC4_3 zf-RING_16
Other DBs
NCBI-GeneID: 132645842
NCBI-ProteinID: XP_060219063
LinkDB
Position
6:118648356..118649981
AA seq 359 aa
MSGYFPQPPPLPMPFTATVNGGATSIPQPVDNTAIINDNPPPSPSPSSSSSSSFIIVIIV
IASAIIVSATIYLILRLLSRRFHRSFRTYAAADDVVSHSAAATAVNGNRCLENQRSTEDE
KLLDSLPLFKFGSVTGNLTGVDCAVCLSKFEPDDQLRLLPLCCHAFHSSCIDAWLVTNQT
CPLCRSTVYPTDEDVLSKVVLASENNELQRNGSFRIEIGSISRRRGGGSDSVSNQRSYSV
GSFDYIVDDGYEVSVNSIHRRGVSESTDKESSIGVAVPAPPGESIASDISGGGGRSWLRD
YVDRIGSFSLSSRSTSFRSSGRFFNASSRRSDTVVPIDDLEAGRIGEEISELFRWLSGV
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtccggctattttcctcagcctccaccactcccaatgcccttcaccgccactgtcaac
ggcggagctacttccattcctcagcctgttgataatactgccattatcaatgataatcct
cctccatcaccatctccatcttcatcttcatcttcttccttcattatagttatcatcgtt
attgcttctgctattatcgtttccgctactatatacctcatccttcgcctcctctcacgg
cggttccaccgctctttccgtacatacgccgccgctgacgacgtcgtgtcacattccgct
gctgctacggctgttaacggaaaccgttgcttagagaaccaaaggagtaccgaagatgag
aagttgcttgattcgttaccgctttttaagttcggttcagttactggtaacttaactggt
gttgactgtgccgtttgcttatcaaaattcgaaccggacgatcagttgagactacttccg
ttatgttgtcacgcgtttcatagcagttgtatagacgcgtggcttgtaacgaaccagact
tgtccgctttgcaggtctactgtataccctacagacgaagacgtgttaagtaaagtagta
ttagcttcagaaaataatgagctgcagcgtaatggtagttttcgtattgaaatcggtagt
ataagtcgccgacgtggcggtggttcagattccgtcagtaatcagagatcatattctgtg
ggctcatttgattacattgtggatgacggttacgaagtttcagttaactctattcatcgg
agaggtgtttctgaatctactgataaggaatcatcgattggtgttgctgtaccggcgcca
cctggtgagagtatagcttctgatatttctggtggtggtggacggagttggctaagggat
tatgttgatagaattggttcgttttctctatcgtctcgatcaacgtcctttcgaagctct
ggtaggtttttcaacgcaagtagccgacggagcgatactgttgttcctattgatgatttg
gaagctggtcggattggggaagagattagtgaattgtttcgatggctttcaggggtatga

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