KEGG   Lycium barbarum (goji berry): 132645929
Entry
132645929         CDS       T09483                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03022  Basal transcription factors
lbb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132645929
  09124 Replication and repair
   03420 Nucleotide excision repair
    132645929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    132645929
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132645929
Transcription machinery [BR:lbb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     132645929
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     132645929
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 132645929
NCBI-ProteinID: XP_060219170
LinkDB
Position
6:120127347..120139671
AA seq 336 aa
MADFTTSTHRNKWIFTPHDIKHKYKVANHRAKQALDKYGTTRMEVDIDGSFSYAESQNDA
KDSAEKRPKPLKVEEEQLLRAFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLQWSVMEH
HPKDIMLTCIYAACKAEENHVSAEELGKGIGQDHHVILNNEMLVFQSLGFDLIVYAPYRA
LEGFISDLEEFCGAKDDDQLVALKLSLFSSEVQASLETARMEADKIMRTDGPLLFPPGQL
ALAALHRANAVHGLFDFERYLRSVLSHDHPAHAISELAGSINAIDSLIGKLSTPTSKDVK
HIDRKLKSCLDPGSHDKSKKRKHRSKDSSNEVTDIS
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggctgatttcacgacatctactcatagaaacaagtggattttcactccccatgatatt
aaacataagtataaagttgctaatcatagagccaaacaagcactagacaagtatggaaca
acacgaatggaagttgatattgatgggtcattctcatatgctgaaagccaaaatgatgca
aaagatagcgctgaaaagcgtccaaaaccactcaaggttgaagaagaacaacttctaagg
gctttctatgagttcaaaattcaagatgtctgtgatgcctttaagttcccacgtaagatt
caggcaacagctctcatctattttaagaggttttatctacaatggtctgtgatggaacat
caccccaaagacattatgttaacctgcatatatgcagcttgcaaggcagaggaaaatcat
gtatcagctgaggagcttggtaaggggattggacaggatcatcatgtaatcctcaataat
gaaatgctggttttccagagtctaggatttgatcttattgtttatgctccatatcgtgca
cttgaaggttttatcagtgatttagaggagttctgtggagcaaaagatgacgaccagctt
gtggcactgaagctaagtttattttcttctgaagtacaggcttcacttgaaactgctagg
atggaagcagataagattatgcgtaccgatggaccacttctattcccacctgggcagttg
gcattggcagcattgcatagagctaacgcagtgcatggcctatttgattttgagaggtac
ctgagaagtgtcctatcacatgatcatccagctcatgccatttcagaacttgctggttct
ataaatgccattgattctttgattggtaaactttcgactcctacttccaaagatgtgaag
cacattgatcggaaactcaaatcatgtcttgatccgggttcgcatgacaagagtaagaaa
aggaagcatagatccaaagatagctcaaatgaggttacggacatctcttga

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