Lycium barbarum (goji berry): 132645978
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Entry
132645978 CDS
T09483
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132645978
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132645978
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132645978
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132645978
03041 Spliceosome [BR:
lbb03041
]
132645978
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132645978
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
132645978
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132645978
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132645978
Spliceosome [BR:
lbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132645978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
132645978
NCBI-ProteinID:
XP_060219260
LinkDB
All DBs
Position
6:complement(120860767..120863950)
Genome browser
AA seq
315 aa
AA seq
DB search
MEGLMEKGVLDDIIRRLLEEKGGKQVQLSEAEIRQLCVNARQIFLSQPNLLRIRAPIRIC
GDIHGQFQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLR
GNHEDAKINRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGISPELKN
LEQINEIQRPAEIPDGGLLCDLLWADPDPRIKGWSDSDRGVSCTFGPDVVAEFLAKNELD
LICRGHQVVEDGYEFFAKRRLVTLFSAPNYGGEFDNAGALLSVDEQLVCSFEILKPVLTS
SSKLPLKKPPKVGGN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaagggttgatggaaaagggtgttttggatgatataataaggagattattggaagag
aagggaggtaaacaagttcagctatctgaggctgagatccgacagctttgtgttaatgct
cgccagattttcctttctcagcctaatctcctcaggattcgtgcccccattaggatctgt
ggtgacatacatgggcaattccaagacttattaagacttttcgaatatggtggctatcct
ccttcagcaaactatctttttcttggggattatgttgatcgtggcaagcagagtttagaa
acaatatgtttgctactggcgtacaaaataaggtaccctgacaagatcttccttctaagg
gggaaccacgaagatgcaaaaatcaacagggtctatggattttatgatgaatgtaaaagg
agattcaatgttaggctatggaagatattcacggactgctttaattgtttgcctgttgct
gcacttattgatgaaaagatcctttgcatgcatggcggaatttctccagaactaaaaaat
ctggaacaaataaacgaaatccagcggccagctgagattccagatggcggcttgctgtgt
gatctgctgtgggctgatcctgaccctagaattaagggttggtcagatagtgatcgaggt
gtttcttgtacttttggacctgatgtagttgctgaatttttggctaagaatgagttagac
ctcatctgccggggtcatcaggtggtggaggatggatatgaattctttgctaagcgaaga
cttgtgactctattttctgctcccaattacggtggggaattcgataatgcaggtgcccta
ttaagcgttgatgagcaacttgtatgctcctttgaaatattgaaaccggtattaactagc
agttcaaagttgccccttaagaagccacctaaggttggagggaactga
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