KEGG   Lycium barbarum (goji berry): 132645978
Entry
132645978         CDS       T09483                                 
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132645978
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lbb01009]
    132645978
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    132645978
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132645978
   03041 Spliceosome [BR:lbb03041]
    132645978
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     132645978
Protein phosphatases and associated proteins [BR:lbb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     132645978
Transcription machinery [BR:lbb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     132645978
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     132645978
Spliceosome [BR:lbb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    132645978
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 132645978
NCBI-ProteinID: XP_060219260
LinkDB
Position
6:complement(120860767..120863950)
AA seq 315 aa
MEGLMEKGVLDDIIRRLLEEKGGKQVQLSEAEIRQLCVNARQIFLSQPNLLRIRAPIRIC
GDIHGQFQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLR
GNHEDAKINRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGISPELKN
LEQINEIQRPAEIPDGGLLCDLLWADPDPRIKGWSDSDRGVSCTFGPDVVAEFLAKNELD
LICRGHQVVEDGYEFFAKRRLVTLFSAPNYGGEFDNAGALLSVDEQLVCSFEILKPVLTS
SSKLPLKKPPKVGGN
NT seq 948 nt   +upstreamnt  +downstreamnt
atggaagggttgatggaaaagggtgttttggatgatataataaggagattattggaagag
aagggaggtaaacaagttcagctatctgaggctgagatccgacagctttgtgttaatgct
cgccagattttcctttctcagcctaatctcctcaggattcgtgcccccattaggatctgt
ggtgacatacatgggcaattccaagacttattaagacttttcgaatatggtggctatcct
ccttcagcaaactatctttttcttggggattatgttgatcgtggcaagcagagtttagaa
acaatatgtttgctactggcgtacaaaataaggtaccctgacaagatcttccttctaagg
gggaaccacgaagatgcaaaaatcaacagggtctatggattttatgatgaatgtaaaagg
agattcaatgttaggctatggaagatattcacggactgctttaattgtttgcctgttgct
gcacttattgatgaaaagatcctttgcatgcatggcggaatttctccagaactaaaaaat
ctggaacaaataaacgaaatccagcggccagctgagattccagatggcggcttgctgtgt
gatctgctgtgggctgatcctgaccctagaattaagggttggtcagatagtgatcgaggt
gtttcttgtacttttggacctgatgtagttgctgaatttttggctaagaatgagttagac
ctcatctgccggggtcatcaggtggtggaggatggatatgaattctttgctaagcgaaga
cttgtgactctattttctgctcccaattacggtggggaattcgataatgcaggtgcccta
ttaagcgttgatgagcaacttgtatgctcctttgaaatattgaaaccggtattaactagc
agttcaaagttgccccttaagaagccacctaaggttggagggaactga

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