Lycium barbarum (goji berry): 132645993
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Entry
132645993 CDS
T09483
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132645993
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132645993
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_8
F-box_5
LRR_14
LRR_At1g61320_AtMIF1
APOBEC1
APOBEC4_like
F-box
Motif
Other DBs
NCBI-GeneID:
132645993
NCBI-ProteinID:
XP_060219280
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Position
6:complement(121111010..121118523)
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AA seq
643 aa
AA seq
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MDCAPLLSLLNDDLLIRILSFITHDSDRKSFRLVCRTFLKVDSFHRTHIRILRPEFITTL
FSKFPRINSLDLSICPQINDGAVSMLMGHGSTHWSIRLRKLVLSRSTGLKSTGLEMLMKS
CPVLESVDVSYCWDFGDKEAAALSFGGSLREVKMDRCLGVSDVGLAKIAIGCQCLEKLSL
KWCSEITDLGVDLLTKKCTELKHLDISYLKVTSGSLRSISSLEKLEFLAMVGCSTVDNEG
LHYLGKGCPSLQALDVSRCDRLSSSALAFLINGHPLMLQIYASYYFHEYPTKIIQGLKDL
KNLKTLVLDGALVSESFFKIINFNCKYLVEIGLGKCKGVTDKGIFQLVSGGLNLNVLNLT
CCSDLTDIAISAITDSCQSLLCLKLECCNLLTEKSLYRLGLHCSLLEEIDLTDCFGVNDT
GLSYLSKCTKLVCLKLGLCINITDKGLYAIARNCREIRELDLYRCKGIGDDGLYALSSGC
KRMQKLNLSYCSEVTDKGIECLGHLPELYNLEMRSLLNVTGTGLTALATRCCGLAELDVK
DCANIDDSGFMALAYYSRNLQQINLSHCAISDVGLCMVMGNLTCLQDAKLVNLYNVSTNG
FEVALRACCVRLKKVKLVASLRLHLTPDIFKTLRAKGCRIRWD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgctccattactttccctccttaacgatgatcttctaatccgaatactctcc
ttcattacccatgattcggaccgcaaatctttccgtttagtttgtagaacattcctcaaa
gttgactcattccaccgtacccatatccggatcctccgacccgaattcatcactaccctt
ttctccaaattcccacgtatcaactcccttgatctctccatctgcccacaaatcaatgac
ggggcagtttccatgctgatgggtcacgggtcgacccattggagtatccggttaaggaaa
ctggtactgagtcggagcaccgggttgaagtcaaccgggttggaaatgcttatgaagtca
tgtcctgttttggagtctgttgacgtgtcttactgctgggattttggtgacaaggaagct
gctgctttgtcttttggtgggtctttaagggaggtaaagatggataggtgtttgggtgtt
agtgatgttggtttggctaaaatagcaattgggtgtcaatgcttagagaaacttagcttg
aaatggtgcagtgaaataactgatcttggggttgatcttttgaccaagaaatgtactgaa
ctgaaacaccttgacatttcatacttaaaggttactagtggatcgttgcgttctattagc
agtttggagaagttggagtttttggctatggtgggatgcagcactgtggacaatgaagga
ctgcattatcttggaaaagggtgtccttcgcttcaggctctggatgtatcaaggtgtgac
agactaagctcatctgccttagctttcttgattaatggacaccccttgatgctacaaatc
tacgctagttactatttccatgagtatcctactaaaatcatccaagggctgaaggaccta
aagaatctgaaaacgctcgtacttgatggagcactagtttctgaatcattcttcaagatc
attaatttcaattgcaagtatttggttgaaattgggctaggcaaatgcaaaggagtgact
gacaagggaattttccagttggtatcagggggtcttaatttgaatgtcttgaatctcaca
tgctgcagcgatcttacagatattgcaatatcagctataacagattcttgccagagtctt
ttgtgcctcaagttggagtgctgcaacttactcactgagaagagcctatatcgcctcgga
ttacactgttccttacttgaggagattgatcttactgattgttttggagtcaatgacact
ggactttcttacctgtctaaatgtacaaagcttgtatgtctaaagttgggattatgtatt
aatattaccgacaagggcctgtacgctattgctagaaattgcagggagattcgtgaactg
gatctataccggtgcaaaggaattggtgatgacggactctatgctttatcaagtggttgc
aaaaggatgcaaaagttaaacttgtcttattgcagtgaggtcactgataaagggattgaa
tgtctcggccatctaccagagctctataacctcgagatgcgaagtctgttgaatgtcaca
ggcactggtttaacagctcttgctactagatgctgtggacttgctgagttggatgtgaaa
gactgtgctaacattgatgattcgggtttcatggcgcttgcttattactctaggaattta
caacagattaatctgagtcattgtgcaatctcggatgtgggcctgtgcatggtgatgggg
aacttgacatgcttgcaggatgccaagctcgtaaacctttacaacgtgtcaactaatggc
tttgaggttgctcttcgggcttgctgtgttcgattgaaaaaagttaagttggtcgcctcc
ctgagactacaccttacaccggatatatttaagacattgagggcaaaaggttgcaggatt
aggtgggattaa
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