Lycium barbarum (goji berry): 132646002
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Entry
132646002 CDS
T09483
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132646002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132646002
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132646002
Complex C
U4/U6.U5 tri-SnRNP related factors
132646002
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GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
132646002
NCBI-ProteinID:
XP_060219298
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Position
6:121309324..121312548
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AA seq
380 aa
AA seq
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MANRTDPLAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPAPFICLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDVDIYRYL
EPLYNDYRKLRRKLADGQYALTHVDEYIDELLTTDYSCDIALPRIKKRWILEQNKTLEPR
RSALEDDFEEEEEKDEDEPLATGLDDEHEKDYYRGASPTRERDRDRRRDSHRHRDRDYDR
DRDYDRDYDRERDYDRERGSRRDRDRDRDRDRLRLRDDKDYGRERDRERGRERDRRDRDR
EHGRRRSYSRSRSRSRDRKDREDDRRKRRSSASPARDEPKKKKDKKEKKEKKADGTDHPD
PEIAEANRLRASLGLKPLNC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgaaccgacccattagcaaagagcattaggggaacaaacccacaaaactta
gtagaaaaaatccttcgttccaaaatataccaaaacacatactggaaagaacaatgcttc
ggattaacagcagaaacattagtggataaagcaatggaacttgaccacttaggtggaaca
ttcggtggtaatagaaaacctgcaccttttatttgtcttgtaatgaagatgcttcaaatc
caacctgaaaaagatattgttgttgagtttatcaagaatgaagattataagtatgttcgt
gttcttggtgctttttatttgagacttactggtactgatgttgatatttatcgatatctt
gagcccttgtataatgattatcgcaagcttaggcgtaaattagctgatggccagtatgca
ttgacacatgtggatgagtatattgatgaactattgacgacagattactcttgtgatatt
gctttgccccgcatcaagaaaagatggatattggaacagaataaaacgttggaacctcgg
agaagtgcgttggaagatgactttgaagaggaagaggaaaaggatgaggatgaaccactt
gccactggattagatgatgagcatgaaaaggattactatcgtggggcaagtccaactagg
gagagagatcgggatagaagacgagatagtcacagacatagggatcgtgactatgacaga
gatcgagattatgatagagactatgacagagagcgtgattatgacagggaacgtggcagc
aggcgtgacagggatagagacagggaccgggaccgtcttcgcctcagggacgataaggac
tatggacgcgagagggatcgagaaaggggcagggaacgtgatagacgtgaccgtgaccgt
gagcatggtcgacgtaggagttactctaggagcagaagtagaagcagagaccgtaaagat
cgtgaggatgaccgtcgtaaaaggcgcagcagtgctagtcctgctcgggatgaacctaag
aagaagaaggacaagaaggagaagaaagaaaagaaagctgatggaacagatcatccagat
ccagagatcgcagaagccaacaggcttagggcatcgctcggattaaagcctttgaactgt
tga
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