KEGG   Lycium barbarum (goji berry): 39333142
Entry
39333142          CDS       T09483                                 
Symbol
rpoA, E2270_pgp034
Name
(RefSeq) RpoA
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    39333142 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    39333142 (rpoA)
   03400 DNA repair and recombination proteins [BR:lbb03400]
    39333142 (rpoA)
Enzymes [BR:lbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     39333142 (rpoA)
Transcription machinery [BR:lbb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     39333142 (rpoA)
DNA repair and recombination proteins [BR:lbb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      39333142 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-GeneID: 39333142
NCBI-ProteinID: YP_009561859
UniProt: A0A410SNL1
LinkDB
Position
Pltd:complement(80343..81356)
AA seq 337 aa
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQD
IILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLIKTPQNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDIKQILGILEKYFVIDLAKNKF
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agaacagacagtaaacgcctttattatggacgctttattttgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaaagtaccacatgaatattctaccataacgggcatt
caagaatcggtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatcta
tatggaacttctgacgcgtctatttgtgtcaaaggtcctggatatgtaactgctcaagat
atcatcttgccgccttatgtagaaatcgttgataatacacaacatatagctagtttaacg
gaaccaattgatttttgtattggattacaaatagagagaaatcgtggatatcttataaaa
acgccacaaaactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aacgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggaagtttaactccgaaagaagcacttcatgaagcatcccga
aatttaattgatttatttattccctttttacatatggaggaagacaacttatatttacag
gacaatcaacacacggttcctttatccccttttacctttcatgataaattggctaaactc
ataaaaaacaaaaaaaaaatagcattgaaatcgatttttattgaccaatcagaattgcct
tccaggatctataattgcctcaaaatgtccaatatatatacattattggaccttttgaat
aacagccaagaagatcttatgaaaattgaacattttcgtagcgaagatataaaacagata
ttgggcattttagaaaaatatttcgtaattgatttagcaaaaaataagttttaa

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