Laccaria bicolor: LACBIDRAFT_155621
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Entry
LACBIDRAFT_155621 CDS
T01044
Symbol
CHR16212
Name
(RefSeq) chromodomain-helicase DNA-binding protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_155621 (CHR16212)
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_155621 (CHR16212)
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
LACBIDRAFT_155621 (CHR16212)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
LACBIDRAFT_155621 (CHR16212)
SLIK complex
LACBIDRAFT_155621 (CHR16212)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
HTH_Hrp3
Helicase_C
Chromo
ResIII
HDA2-3
Cdh1_DBD_1
DEAD
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
6072957
NCBI-ProteinID:
XP_001877421
JGI:
155621
UniProt:
B0D0U7
LinkDB
All DBs
AA seq
1291 aa
AA seq
DB search
ADDDDDNDEDDGTYADQEYGQKKKLSKKKQRRLSSTIPRPKGASCVPTVRVSSRGGKVPN
YVDDVQDFEKFEDDDEGGENPYFVDPNQQYQEEDEIEAVLNHSRDEGREDDEEDLWFENV
RFHIKWKNFSHLHNTDETYEFLKRFKGLKRVDNYIKAYKIWRSRVDSPGLSREDVEALHL
DKEREKQELEMFRNVERIVAHRESKDGDMEYFCKWNSLNYEHCTWELQKDVNPIAKDEIA
AYRLREAEGKFPYKSVSYSRQGRPTFQKITSDPDYIQATGGELKDFQLTGLNWLAYLWSK
GENGILADEMGLGKTVQTVAFLSYLFHEMHQYGPFLVIVPLSTITAWQTQFAAWAPDMNV
ITYIGTAAAREVIRTHEFGPSNKKLKMNVLLTTYELTLRDSKELGDIKWQALAVDEAHRL
KNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPEKFALTNEFDLTDIDHE
EKIKELHEQLESLMLRRLKKDVLTSLPTKSERILRVEMSALQTHFYKNILTKNFAGLVKS
ANGNNNISLLNIAMELKKAANHPYLFDGAEVRTDNNEETLKGLVMNSGKMVLLDKLLARL
RQDGHRVLIFSQMVRMLDILSDYMSLRGYLHQRLDGMVASEARKKSIAHFNTPGSPDFAF
LLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEE
DVLERAKKKMVLEYAIINQMDTSQAHLSSKATKDPHKPDNLSKDELTAVLKYGAQKMQVD
DSQQSKKLDEMDLDDILNRAEDHETMAQAGEAGGASLGGEGFLAQFAAVSDVKNDMNWED
IIPLDERQKFEADEDERKAEEIAAQELRDRKRTHAPVSYEGMDVDQPAAASAPKKPKAPG
PTRKTASQKAMELKERDVRVLIRSLQRWGDIRQRYDIIVSESKLQDKNKGMMLDVADEII
DICSQAVKDSEDQKRSRIAAGETLTNAQKSKAVLVTCRGVGNINAETVLSRHRDLRILYA
ILSDLDDPYKWSIPIENIRPTLNWSGRWGPQDDSMLLVGAFLYGFGNWEAMAKDQKLGLE
GKFFLEEGKKGEDAASRPIPNAIHLVRRGDFLLSILREHDEKLRSYESSLRNKGQLKVSA
SPPPTALASTSSHSSSLKRRAESEAMASIDDGSLKKRKRRPTPTFTDSESSDECSPSMDE
AATKEELRPVKKQLKQLKLSGEDMPRDDKVAILKDSLAAIGRRIEHVLNAKQAAGEDRER
WRRHLWTFVTLFWPKKVKASKLEEIHAKMVM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
gcagatgacgacgatgacaacgacgaggatgacggtacctatgcagatcaggagtatggt
caaaagaaaaagctttccaagaagaagcaacgcagactgtcctcgacaatcccacggccc
aaaggtgcttcatgtgtacccactgttcgagtgtccagtcggggtggaaaagtacccaac
tatgtcgatgatgtccaagattttgaaaaattcgaagacgacgatgaaggaggtgaaaac
ccttacttcgtggaccccaaccaacaataccaggaagaggacgaaatcgaagccgttttg
aatcatagtcgagatgaaggccgggaggatgatgaagaagatctttggtttgagaatgtg
cgcttccatatcaaatggaaaaacttttcccaccttcataacaccgacgaaacttatgaa
ttcttgaaacgtttcaaaggcctgaagcgcgttgataactacatcaaggcgtacaagata
tggcgctcccgcgttgattctccaggattgtctcgtgaagatgtggaagctcttcatcta
gacaaggaaagggaaaagcaggaactggagatgttccgcaacgtggaacgcattgttgct
caccgagaaagcaaagacggtgacatggagtacttttgcaagtggaacagtcttaattat
gagcattgcacttgggaactccagaaggatgtcaaccccatcgcgaaggacgagattgct
gcctacagactaagagaggcggagggcaagtttccgtacaaaagtgtgtcgtattcgaga
cagggcaggccgaccttccaaaagatcacaagtgatcctgactacattcaagcgacgggc
ggcgagctcaaagacttccagctcactggtctcaattggcttgcttatctgtggagcaaa
ggagagaacggtatattagcggatgagatgggacttggcaagaccgtgcaaactgtagct
ttcctgtcctatctcttccacgagatgcaccagtatggtccatttctggtcatcgttccc
ctgtcgacgattacagcttggcaaactcagtttgccgcttgggctccggatatgaacgtt
ataacttacatcggaaccgctgcagcccgcgaagtcatccgcacacatgagtttgggcca
tctaacaagaaattgaagatgaatgttctgctgacgacgtatgaactcactctgagggac
tccaaagaactcggcgatataaagtggcaagctttggcggttgatgaggctcatcggctc
aaaaactccgagagccagctgtacgaagccctccgatcattctccgccgcttcaaagctc
ctcattacggggactcctttgcagaacaatgtgaaagaacttttgtccttgatgcacttc
ctcatgccagaaaaatttgctctcaccaacgaatttgacctaactgacattgaccatgag
gagaagatcaaagaattacacgagcaactggagtctttaatgctcaggcggttaaagaag
gatgtactgacgtctcttccaacaaagagcgaacgaattctgcgtgtggaaatgagtgcc
ctccagacccatttttacaagaacatactcaccaagaactttgcgggactagttaaaagt
gcgaacgggaacaataacattagtttgctcaacattgcgatggaactcaagaaagctgca
aatcatccttacctgtttgatggtgctgaagttcgtacagacaacaatgaagagacgttg
aaaggccttgtcatgaacagcggcaagatggttcttctagacaagctgcttgcccgtctc
cggcaagacggtcatcgcgttctaatcttcagtcagatggtgcgaatgttggacatttta
agcgattatatgtcgctccggggttaccttcatcaacgtttggatgggatggtggcatcg
gaagcgaggaagaagtctatcgcccacttcaacacccctgggtcccccgactttgcgttc
ctactgtcgactcgtgctggcggacttggtatcaacttggaaacagccgacacggtaatc
atctttgacagtgactggaatccacaaaacgacttgcaggctatggctcgtgcccatcgt
attgggcagaaatcacacgtcagcgtttatcgtttcgttagcaaagataccatggaggag
gacgttttggagcgcgcgaagaagaaaatggtgttggaatatgccatcatcaaccagatg
gatacctcccaggcccacttgagctccaaggcgacgaaagaccctcacaaaccagacaat
ttgagcaaggatgaattgaccgctgttttgaaatatggtgctcaaaagatgcaagtggat
gattcccagcagagcaaaaaacttgacgaaatggacctcgacgacatcctcaatagggct
gaagatcacgagactatggcccaagctggggaagcaggcggtgcatcccttggtggcgaa
ggttttctagctcaatttgcagctgtcagcgatgtcaaaaacgacatgaattgggaggat
atcatacccctggacgaacgccagaaatttgaagctgacgaagatgaacggaaagccgag
gaaattgctgcccaggaattgcgtgataggaagcgcacgcatgctccagtatcatatgag
ggcatggacgtggaccagccggctgctgcgtccgctcccaagaagccaaaggcacccggt
cctacaaggaagacagctagccagaaggcgatggaattgaaagagagggatgttcgtgtt
ctgattaggagtctccagcgttggggtgacatccggcaaagatacgacatcatcgtctct
gaatccaaacttcaagacaagaacaagggcatgatgcttgacgtggcagatgaaatcatt
gatatctgttctcaagccgtcaaggatagtgaggaccagaagcgttcccgaatcgcggct
ggtgaaacattgaccaacgcccagaaaagcaaagcagtcctcgtcacctgtcgtggcgtc
ggtaacatcaatgcagaaaccgtcctttcgcgccaccgtgaccttcgcatcctctatgcg
attctatctgatcttgacgatccttacaagtggagcatcccgattgaaaacatccgtccg
actcttaattggtcaggtcgctggggtccgcaggacgattcgatgctcttggtaggcgcc
ttcttgtacggtttcggcaactgggaggctatggccaaagaccaaaaacttggactcgaa
ggcaagttcttccttgaggaggggaaaaaaggagaagatgctgcaagtcggcccattcca
aatgccattcacctcgttcgtcgaggtgactttttgctgagcatattgcgcgagcatgat
gagaaattacgttcgtacgagagttccctgcggaacaaaggtcagctaaaggtttcggct
tcccctcccccgacagccttggcgtcgacgtcttctcatagcagttccctcaaacggcga
gccgagagtgaggccatggcttctatcgatgacggcagcttgaaaaagaggaaacgtcga
ccgacgcccacattcacagattccgaatcgtccgacgaatgtagcccctcgatggacgag
gcagcaacgaaagaggaactgcggcctgttaagaaacaattgaaacaactaaagctgtct
ggtgaagatatgccccgagacgacaaggttgccatcctcaaagattcgctggctgcaatt
ggccgacgaattgaacatgtgctgaacgcgaagcaagctgcaggggaagatcgggagaga
tggcggcgacatctttggacttttgtgaccttgttttggcccaagaaagtcaaggcttct
aaactggaggagatccacgcgaagatggttatg
DBGET
integrated database retrieval system
