Laccaria bicolor: LACBIDRAFT_159274
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Entry
LACBIDRAFT_159274 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
lbc
Laccaria bicolor
Pathway
lbc03440
Homologous recombination
lbc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LACBIDRAFT_159274
03460 Fanconi anemia pathway
LACBIDRAFT_159274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbc04121
]
LACBIDRAFT_159274
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_159274
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_159274
Ubiquitin system [BR:
lbc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
LACBIDRAFT_159274
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
LACBIDRAFT_159274
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
LACBIDRAFT_159274
FA (Fanconi anemia) pathway
Downstream FA components
LACBIDRAFT_159274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
6069000
NCBI-ProteinID:
XP_001873424
JGI:
159274
UniProt:
B0CRK1
LinkDB
All DBs
AA seq
452 aa
AA seq
DB search
GFILATEPWVKNHWCLILWKLAGMVCLDPHREVIPEEKRWRWEEVIRQLLYRYERELNGG
SRPPFRQIVARDAPAAFPLVLCVSGVSWSEPGVTEDGLPIEPHPELEVTDGWYRLRAQVD
RPMARAIRKGTIKIGRKIGVAGARLSSERKDPMEILEAYNSTKLVISGNSSHLVPWHTKL
GFQRGPCVSTLHSLTADGGVVAAMDLIIIKMYPIAFVEFFEDEDGQKRREGPRNEIEEAQ
VNEKWVVCFLLGEMEFCRRREIEASKLRGELEKKTSRYESYIDRLERKADKIDDLYDQLE
EPTDAAGVLARISPGDAGWLAKHIRRRIESDQERIGEEIEQELRASRRPVLRVHILTFMQ
TNCPARDVRSFRILIVKDARTDRRPANRTAQLTVWDVLNLSLSEGSAAGTFELGKRYLVT
NVIPTQPNAWMDCEPGSEVYLSTRRDSRWTAI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ggttttatacttgcaacagaaccatgggtgaaaaatcattggtgtctcattctctggaaa
ctcgctggaatggtatgtctggatcctcacagagaggttatcccagaagagaagcgatgg
cgttgggaagaggtcatccgtcaactattgtacagatacgaacgcgagctcaatggcggt
agccggccaccgtttcggcaaatagtcgcgcgagatgcgccagcagcatttcctctcgtc
ctctgtgtatctggtgtgtcctggtctgaacctggagtcacggaggatggtctaccgatt
gaacctcatcctgaacttgaagttaccgacggctggtatagactacgcgcgcaggttgat
cgaccaatggctagagccatccgaaagggaacaattaaaattggcaggaagattggcgtt
gctggtgctcgactttcctctgaaaggaaagacccgatggagattttggaggcttacaat
tcaaccaaactagttatatctgggaactcatctcatttagttccctggcacacaaaatta
ggatttcaacgaggtccttgtgtgtctacgcttcactcgttaacggctgatggaggcgtg
gtggccgcaatggacttgataataataaagatgtaccccatagcgtttgttgagttcttt
gaggatgaagacgggcagaagcgtcgagaaggtccgagaaatgaaatcgaagaagcacaa
gtgaatgagaaatgggtggtatgttttcttctgggagaaatggaattctgtaggcgacgc
gaaatcgaggcttccaagttacgaggcgaattggagaaaaagacttctcgctacgagagt
tacattgatcgcctggaaaggaaggcagataagatagacgacctctacgatcagctcgag
gaacccactgatgccgctggtgttctggcgcgaataagccctggcgatgctggctggctg
gcgaagcatattcgtcggcgaattgaaagtgatcaagaacgaataggagaagaaatcgag
caagagcttcgggcaagcagacgtccagttctacgtgtccatatactaactttcatgcag
accaattgccctgctcgcgatgtccgcagcttccgaattctgatcgtcaaggacgcccgc
acggataggaggccggccaatcgtaccgctcaactaacagtttgggacgttctcaatcta
agcctctcagagggaagtgccgcgggcacctttgagttgggaaagagatacctcgtgaca
aatgtgatacccacccagccgaacgcatggatggactgcgaaccaggttccgaggtgtac
ttgagcacgaggcgagatagtagatggacggccatc
DBGET
integrated database retrieval system
