KEGG   Laccaria bicolor: LACBIDRAFT_182440
Entry
LACBIDRAFT_182440 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
lbc  Laccaria bicolor
Pathway
lbc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LACBIDRAFT_182440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_182440
   03036 Chromosome and associated proteins [BR:lbc03036]
    LACBIDRAFT_182440
Spliceosome [BR:lbc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    LACBIDRAFT_182440
 Complex B
    LACBIDRAFT_182440
 Complex C
   U2 SnRNP specific factors
    LACBIDRAFT_182440
Chromosome and associated proteins [BR:lbc03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LACBIDRAFT_182440
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_2 HEAT_ECM29 Adaptin_N XMAP215_CLASP_TOG Htt_N-HEAT_1 DUF3110 DUF5742 Condensin2nSMC
Other DBs
NCBI-GeneID: 6070995
NCBI-ProteinID: XP_001874648
JGI: 182440
UniProt: B0CUG7
LinkDB
AA seq 1146 aa
MSPPGSPRLIDSYTAPKEILQEFADLAEEEDVDPFAETASKRQIAARQSDYHNRRFARQN
EEGKEVEGGYKDAMRLSRLEQEELRVKKAIEEKKRKDREDEKMKMDLDKTPPAAEIEAVS
RELAAAKELANKDAGMKRKRRWDVSEPSDENADPNQRDTGEWSKEALEASAPKKRRSRWD
ATPAEAAVGETPKRSRWDQTPVASNVDVPMTPIIMNAPGFMQEDKHNRYLTDEELDAVLP
TSGYAIVTPPPGYAPMVAPRKFMATPITEVGGFQIQEGSDAAAAAAAAGLAPELPTEIPG
VGNLAFFKAEDAQYFAKILKEEDETELSVDEMKERKIMRLLLKIKNGTPPVRKTALRQIT
DKAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLSKAAGLAHMISTMRPDIDHADEYVRNTTARAFSVVASALG
IPSLLPFLKAVCRSKKSWQARHTGIRIVQQIAIMMGCAVLPHLRNLVDCIAHGLSDEQQK
VRTMTALGLAALAEAAAPYGIESFDNVLKPLWLGIRLHRGKGLAAFLKAIGFIIPLMDPE
YASYYTKEVTVILIREFQTSDEEMKKIVLKVVKQCAATEGVTPQYIKNDILPDFFKAFWV
RRMALDRRNYRQVVETTVELAQKSGVAEIVGRIVNELKDEAEPYRKMVMETITKVVATLG
ASDIDERLEVRLVDGIIYSFQEQTTEDQVMLDGFGTVVNALGIRVKPYLTQIVSTILWRL
NNKSAKVRQQAADLTTRLAVVIKQCGEDQLLSKLGLVLFEQLGEEYPDTLGSIIAAEGAI
ANVVGMTQMNPPVKDLLPRMTPILRNRHEKVQEASINLIGRIADRGAEFVPAREWMRICF
ELLDLLKAHKKGIRRAAVNSFGYIAKSLGPQDVLSVLLTNLRVQERQSRVCSTVAIAIVA
ETCGPFTCIPAILNEYRTAELNVRTGCLKALSFVFEYVGPQSAYYCDSVVTMLEDALTDR
DLVHRQTASTIVKHLALGVAGLGCEDSMLHLMNLVWPNCFETSPHVIGAVMDAIEAMRVT
LGPGVLLSYVLQGLFHPARKVREVYWRTYNALYLGAEDALVPFYPDLSELSEGKNVYDRH
PLQVFI
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgtctccccccgggtcacccagattgatagactcgtacacagctccgaaggaaattctt
caagagtttgcggaccttgctgaagaagaagatgttgatcctttcgcagaaacagcctcc
aagcgacaaattgctgctcgacagtcggattatcataaccgtcgtttcgcccgccagaat
gaggaggggaaggaggtcgagggtggttacaaagatgctatgaggctttctcggttggag
caagaggagttgagggtaaagaaggcgattgaagagaagaagaggaaggatagggaggac
gagaaaatgaagatggacttggacaaaactccccctgccgccgagattgaagctgtctca
cgagagcttgccgctgcgaaggagctggcaaataaggatgcaggaatgaaacgaaagcgc
agatgggatgtttctgaaccctcggacgagaacgcagacccaaaccagcgggacacaggt
gaatggtcgaaggaagctttggaggcatctgcgcccaagaaacgacggtcacggtgggat
gcgacccctgctgaagccgccgttggtgagacccccaaacggtctcgttgggatcagaca
cctgtcgcttcaaatgtggacgtacctatgacccccattatcatgaacgctccagggttt
atgcaggaagacaaacacaatcgttacctgactgacgaggaactcgatgccgttttacct
acgagcggctatgccatcgtcactccacctccaggttatgcccccatggtcgctccccga
aaattcatggcgactcccataaccgaggtgggaggtttccagatccaagaaggttctgac
gcagctgctgcggctgccgccgccggtctcgctccagaactccctacagagattcctggg
gtcggtaacctggccttcttcaaggctgaggacgcccaatactttgccaaaattctcaag
gaggaagacgaaacggagttgtcagtggacgagatgaaggagcggaagattatgcgactt
cttttgaaaataaagaacggtactcccccagtccgtaaaacagcacttcgtcagatcacg
gacaaagctcgtgaatttggcgccggcccccttttcgataaaattcttcctctattaatg
gagcgcactctcgaagatcaagagcgacatcttctcgtcaaggttattgatcgcgtatta
tacaaactggacgacctcgttcgaccatatgttcacaagatcctcgttgtcatcgagccc
ctcctcattgacgaagactattatgcccgtgtagaaggccgcgagatcatttccaacctt
tccaaggctgctggtcttgcccacatgatatcgacaatgcgccccgatatcgatcacgcc
gacgagtacgtacgcaacacgactgctcgcgcattctccgttgtcgcttccgccttgggc
atcccatctctccttcctttcctcaaagccgtctgccgttctaaaaagtcatggcaagct
aggcacactggtatccgaattgttcaacaaattgcgatcatgatgggctgcgcggtatta
ccccatcttcggaacttggtggactgcattgcgcatggtctatctgacgagcagcaaaaa
gtcaggactatgacagctctcgggttagccgcgttggcagaagctgctgctccttacggt
atcgaatcctttgacaacgtcttgaaacctctctggttgggcatccgtctccaccgcggc
aaaggtcttgcagccttcttgaaggctattggcttcatcattccccttatggaccccgaa
tacgcttcttactacaccaaagaagtcacagtcattctcattcgtgagttccaaacgtct
gacgaggagatgaaaaagatcgtcttgaaggttgtcaaacaatgcgccgccactgaaggt
gtaaccccccaatacatcaaaaacgatatacttcccgatttcttcaaagcattttgggtc
cgtcgtatggctctagacaggcggaattacagacaagtagtggaaaccactgtcgagctt
gcacagaagtctggtgtggctgagattgttgggaggatcgttaatgaattgaaggacgaa
gccgaaccctaccgaaagatggtaatggagaccattacgaaggttgttgccacccttgga
gcctcagatatcgacgagaggctggaggttaggctggtcgatggcatcatctactctttc
caagagcagacaacggaagatcaggtcatgcttgatggtttcgggactgtggtaaacgct
ttgggcatccgtgtcaagccttacctgactcaaatcgtctccacgattctctggcgtctc
aacaacaagagtgcaaaggttcggcaacaagcagccgatctgactactcgcttggctgtc
gtaatcaagcaatgcggagaggatcagctgttgagcaagctcggcctcgtgctgtttgaa
cagctgggagaagaatacccagatacactcggaagtatcatagccgctgaaggtgccatc
gcaaacgttgttggaatgacccaaatgaacccccccgttaaggatctcttaccgagaatg
acacccattctccgtaatcgacacgagaaagtacaagaggcgtctatcaatttgattggt
cgtattgctgatcgaggtgccgaatttgtgcctgcacgagagtggatgcgtatctgtttc
gagcttttagatcttctgaaggcacacaaaaaaggcatccgtagggctgctgtcaactcc
tttggctacatcgcgaaaagtttgggaccccaagatgtgctctccgtgctgttgacgaac
cttcgtgtgcaggaacgacaaagtcgagtatgcagtacggtggctattgccatcgtggct
gaaacttgtggaccgttcacatgcattccagcgattctgaatgaataccgaactgcagag
ctaaacgtgcgaacaggttgtctcaaagccctctccttcgttttcgaatacgttggtcca
caatcggcgtattattgtgactccgtggtcacaatgcttgaggatgctctcaccgacaga
gaccttgtccacagacagacggctagcaccatcgtgaagcatcttgctctaggagttgca
ggtctcggttgcgaggactcgatgctccatctcatgaaccttgtgtggcccaactgcttc
gagacatcccctcacgttattggagcagtgatggacgcgattgaggctatgcgggtgacg
ctgggaccgggcgtgttgttgagttacgtgctgcagggtttgttccatccggcccgaaag
gttcgcgaggtttactggcgtacttacaatgcgctgtaccttggcgcggaggatgccctg
gttcccttctaccctgatttgagcgaactcagcgaaggaaaaaatgtttatgatagacat
cctctccaagtatttatctga

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