Laccaria bicolor: LACBIDRAFT_182594
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Entry
LACBIDRAFT_182594 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
lbc
Laccaria bicolor
Pathway
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_182594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_182594
Spliceosome [BR:
lbc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
LACBIDRAFT_182594
Complex C
U5 SnRNP specific factors
LACBIDRAFT_182594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
6071478
NCBI-ProteinID:
XP_001875909
JGI:
182594
UniProt:
B0CVX2
LinkDB
All DBs
AA seq
2314 aa
AA seq
DB search
MQRKRYGEKRRGGYVDMGKQARRIADLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKY
VPHAVMKLLENIPFPWEQVREVPVLYHITGAITFVNEIPRVIEPVYHAQWSTMWLAMRRE
KRDRRHFKRMRFPPFDDEEPPLDYGDNVLDVDPLEAIQLDLDTEEDSAVIDWFYDPKPLI
DTPSVNGSSYKFWSLSLPVMANLYRLGRTLLSDQADRNATYLFDKNAFFTAKALNMAIPG
GPKFEPLYRDMDNFDEDWNEFNDINKVIIRQQIRTEYKVAFPHLYNSLPRSVRISPYHYS
KNVYIRTDDPDLPAFYFDPLINPISLRGHTPKNAPLVSHEDSIFGPNDTDDDDFVLPEAV
EPFLQQKDLETELTADGIALWWAPEPYGRRSGRMRRAQDIPLVKNWYLEHCPPGQPVKVR
VSYQKLLKCFVLNELRTRPEKAMTKKNLFRQLKATKFFQTTKLDWVEAGLQVCRQGYNML
NLLIHRKNLNYLHLDYNMNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQF
RLGNVDAFQLADALQYIFSHIGALTGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKG
PGCGFWAPGWRVWLFFMRGIVPLLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHYDLE
LRAAVMHDILDMMPESIKQNKSKTILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIK
SKADWWCSVAHYNRERIRRGATVDKAVVKKNLGRLTRLYLKAEQERQHGYLKDGPYISAE
EAVAIYTATVHWLESRKFAPIPFPPLSYKHDTKLLVLALEKLKEAYSVKGRLNQSQREEL
ALIEQAYDNPHECLSRIKRLLLTQRAFKESGIEFFDTYDKLIPCYDIEPVEKITDAYLDQ
FLFFEADKRGLFPAWIKPADTEPPPLLVYKWCQGINNLTDIWETSEGECNVLMETVLSKV
YEKIDLTLLNRLLRLILDHNLADYITAKNNTVLTYKDMAHTNAFGLIRGLQFSAFVFQYY
GLVLDLLILGLQRASEMAGPPQMPNNFLQYRDSATETRHPIRLYSRYVDRLHILFRFTAD
EARDLIQRYLSANPDPTNNNVIGYNNKRCWPRDCRMRLIKHDVNLGRAVFWNVKQSLPRS
LTTIEWEDSFVSVYSQNNPQLLFSMCGFEIRILPKIRTMSGEQFSLKDAVWNLTNEQSKE
RTAQAFLRVSDDGVQAFNNRIRQVLMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNE
LLDSLVKAENKIQTRVKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWS
KQTDVAVTHFRAGMTHEEDQLIPNLYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRL
TLEDLEDSWDRGIPRINTLFQKDRHTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGK
LWQLNNYRVDVIAALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQR
SGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ
KIHESVVMDLCQVFDQELEPLQIETVQKETIHPRKSYKMNSSCADILLFSAYKWNISRPS
LVTDVKDVLDGTTSNKYWIDVQLRWGDFDTHDIERYTRAKFLDYVSDSMSIYPSPTGVMI
GMDLAYNLWSAYGNWFPGMKPLIQQAMAKIMKANPACHVLRERIRKGLQLYSSEPTEPYL
NSQNYSELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIH
TSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIV
IKGSELQLPFQACMKMEKFGDLILRATQPQMVLFSLYDDWLKSISSYTAFSRLILLLRGL
HVNNEKAKIILHPDKSTITEPHFVWPTLSDEEWIKVEVAMKELILADFGKRNSVNIASLT
VSEVRDIILGQEIAAPSVQRQQMAELEKSSEAQAQVTAVQTQTTNVHGDTIQTVTTTNYE
QQVFSSKSDWRVRAISATHLPLRLQHIYVSNDDVKDDAASFTYVLPKNILRAFITAADLR
TQVAAYLYGVSPADNKQVKEIKAVVWVPQRGSNNSVELPAQLPKDDFLLKDLEPLGWIKT
QALEIAHLSPTDVTTQAKLMADHPEWSSSSICLTASFTPGSVSLSAHSLTVPGFEWGRKN
QDNSVNPPGFNPNMSERVQLLLSDRILGMTLVPEGRVWNYGIGLTQLWSPNLSYSMTLDT
PLLFWAEEHRPAAFLSFANLEQAEDSADVENSFA
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaaaaagatatggtgagaagaggagagggggatacgtagacatgggaaagcag
gcgcgtcgtattgctgatttaccacctgagcatgtccgcaaaattattaaagaccacggt
gacatgagcaaccgcaagttcaggaatgataagcgtgttcatctcggcgctctaaagtat
gttccacatgctgtcatgaagttgttggagaacattcctttcccttgggagcaagtacgc
gaagttcctgtgctgtaccacataactggtgccataaccttcgtgaacgaaattcctcgt
gtcattgaacccgtctatcacgcgcagtggagcacaatgtggttggcgatgcgtagggag
aaaagggatcgtaggcacttcaagcgtatgcgatttccgccgttcgacgatgaggagcct
cctttggactatggcgacaatgtcctcgatgtggatcctctagaggcaattcagcttgac
cttgacacggaggaagatagtgccgtcattgattggttctatgaccccaagcctctcatt
gacactccgtctgtcaacgggtcgtcttacaagttttggtcgctctcattgccagtaatg
gccaacttgtatcgtcttggaaggactttgttgtcagaccaagccgaccgcaatgcgacc
taccttttcgacaaaaatgctttcttcacggcgaaagctctcaatatggctattccaggt
ggaccaaagtttgaacctctgtaccgcgacatggataactttgatgaagattggaatgaa
ttcaacgatatcaacaaagtcatcatccgccaacaaatccgtaccgagtacaaagtcgct
ttcccgcatttatacaattctttgccgcgttcagtccgcatctcgccgtaccactattcc
aaaaacgtttacatccgcacggacgatcctgacctacctgctttctatttcgatcctctt
atcaaccctatctctttgcgagggcacacgccaaagaatgcaccacttgtttctcatgaa
gacagcatttttggtccaaatgataccgacgatgacgattttgtcttgcctgaggccgtt
gaacctttcctgcagcagaaggaccttgaaaccgagctcacagctgatggaattgcctta
tggtgggcgccagagccgtatgggcgacgctcggggcgaatgaggcgggcgcaggatatt
cccttggtgaagaattggtatctggaacattgccctcctggccaaccagtgaaagtcagg
gtttcataccagaaacttctcaagtgctttgttctcaatgaactcagaacgagacctgag
aaggcgatgacgaagaagaatctcttccgtcaattgaaagcaaccaagttcttccagacg
acaaaactggactgggttgaagccggtttgcaggtctgcaggcaggggtataacatgctc
aacctcctgatccatcgcaaaaacttgaactatctgcatcttgactacaacatgaatttg
aagcctgtgaagacgctgactactaaagagcgcaagaaatcccgctttggaaatgccttc
catttgtgtcgtgaaattctccgcttgaccaagcttgttgtggacgctcacgtccagttc
cgtcttggaaacgttgatgcgttccagcttgccgacgcccttcagtacatctttagtcac
attggtgcactgaccgggatgtatcgctataaatacaagcttatgaggcaagttcgcatg
actaaggacttgaagcacctgatctactatcggttcaacacaggccctgtagggaagggt
cctggttgtggtttttgggcaccaggttggcgtgtgtggttgttcttcatgcgaggaatt
gttccactccttgaacgatggttgggtaaccttcttgcccgtcagttcgaaggcagaaat
agcaaaggcatcgcaaagacggtaacaaaacaacgagtagagtcacactacgatttggag
ttgcgtgctgcagttatgcacgatattctggacatgatgccagagtctatcaagcaaaat
aagtcgaagacgatcttgcagcatttgtcggaagcatggaggtgctggaaagccaacatt
ccgtggaaggtgccgggcatgcctacagctatcgaaaacatcatccttcggtacatcaag
agcaaggcagattggtggtgctcagtggctcactataatcgggaacgtatcaggcgtggc
gctaccgtcgacaaggccgttgtgaaaaagaatcttggtcgcctcacccgtctttatctt
aaagctgagcaggagaggcaacatggatatctgaaggatggcccttacatcagcgccgaa
gaggcggtggccatttacacggctaccgtccactggctggagagccgcaagtttgctccc
attccattccccccgttgtcatataagcacgatacaaaacttttggtcttggctctggag
aaacttaaggaggcgtattccgtcaaaggccgtctcaatcagtcacagcgagaggaactt
gcgttaatagaacaagcttacgataaccctcacgaatgtctatcacgtatcaagcgattg
ctactgacacagcgcgcattcaaagagtccggcattgagttcttcgatacatatgacaaa
ctcatcccatgctacgatatcgagcctgtggagaagataacggatgcttatctggatcaa
ttcctcttcttcgaggctgacaagcgtggtcttttccctgcttggatcaagcccgccgac
actgaaccccctcctctgctggtttacaaatggtgccaaggcatcaacaaccttacagac
atctgggaaactagtgaaggcgaatgtaacgtgctcatggagactgtgttgtccaaggtc
tacgaaaagattgacttgacactcctcaatcgtcttctccgtctaatccttgaccacaat
ctagcagattacatcacggcaaaaaataacactgttctcacttacaaggatatggcccat
actaatgcgtttggcttgattcgagggcttcaattttctgctttcgttttccagtactat
ggccttgtcctcgatcttctcatccttgggctgcaacgagcaagtgaaatggctggccca
ccacagatgccgaataatttcttgcaataccgtgactcagcgactgagacccgtcatccg
attcgcctctactctcgttatgtcgacaggctccacattctattcaggttcactgcggac
gaagctcgcgatctcatccaacggtacctttcagccaatcctgaccccacgaacaacaac
gttattggttataacaacaaacgttgctggccgagagattgccgcatgaggctcatcaaa
cacgatgttaacttgggccgggccgttttctggaacgtcaagcaaagtcttccgagatct
ctaacgacaatcgagtgggaggattcttttgtcagtgtctattcgcaaaacaaccctcag
cttcttttctctatgtgtggctttgagatccgcattctacccaagatacgcaccatgtct
ggggaacaattttctttgaaagatgcggtctggaacttgaccaacgaacaatccaaggag
agaacagctcaggcattccttcgtgtatctgatgatggcgtacaagcattcaacaacagg
attcgtcaagttctcatgagttcaggctccacgactttctccaaaattgtgaacaaatgg
aacactgctttgattggtctcatgacgtactaccgcgaagctgttatccatacaaatgag
cttctagactccctcgtcaaggcggaaaacaaaatccaaacccgtgtcaagattggcctg
aacagtaaaatgccatctcgtttcccgcctgttgtattctacacgccaaaggaacttggc
ggtcttggaatgctgtctatgggacacgtcttaattcctcaaagtgatcttcgatggtcg
aaacaaacagatgttgctgtcactcacttccgtgctggcatgacacacgaggaggaccaa
ttgattcctaacttgtatcgctatcttcagccatgggaagctgaatttttggactctgct
cgtgtatggtcagaatactccatgaaacgcaaggaagccaatgcccaaaatcgacggtta
acgctagaggacttggaagacagttgggatcgaggtattccccgtatcaacaccctcttc
cagaaggaccgacatactttggcgtatgaccgtggatggcgtgtacggacggactggaaa
cagtaccaacttttgaagcacaacccattctggtggacatctcagcgtcacgacggaaaa
ttgtggcaactcaacaactaccgtgtggacgtgatcgctgcgctgggaggtgtcgaaggt
attctggagcataccctcttcaaaggaacatatttccctacttgggaaggtttgttctgg
gagaaagcatctggattcgaggagtcaatgcgatacaagaagctaactaacgcccaacgg
tctggtctcaatcaaattcctaatcgtcgctttactctctggtggagtccaactataaat
cgtgccaatgtttatgtcggtttccaagtgcagctcgatctgacaggcatcttcatgcat
ggcaaaattcctaccctcaaaatcagtttgattcagatcttccgagcccatttatggcaa
aagattcacgaaagcgtggtcatggatttgtgtcaagttttcgatcaggagcttgaaccc
ttgcaaatcgagacagtccagaaggagaccattcatcctcgtaagagttacaagatgaac
tcctcatgtgcagatattctgctcttttccgcttataagtggaatatttcacgaccctca
ctcgtcactgatgtgaaagatgttctggatggaactaccagcaataagtactggatcgat
gttcagttgagatggggtgacttcgacacgcacgatattgaacgctacactcgtgccaag
ttccttgactatgtgtctgattctatgagtatctacccgtctcctacgggtgtcatgatc
ggcatggatctggcctataacttgtggtcagcctacggaaattggttcccaggaatgaag
cccttgatccaacaagctatggcaaagatcatgaaagcgaaccctgcttgtcacgtgttg
cgagagcgtataagaaagggtttgcagctgtactcttcagagccaactgagccctacttg
aacagccagaattactctgaactcttttcgaaccaaattatctggttcgtggatgacacc
aacgtttaccgtgtgacaatccacaaaacattcgagggaaatttaaccaccaagcccatc
aatggagcaattttcatcttcaatcctcggtctggacaacttttcctcaagatcatccac
acaagtgtttgggctggccaaaagcgtcttggccagctagctaagtggaagactgcagaa
gaagttgcagccttggtgaggtctctccctgttgaggagcagccgaaacaagtaattgta
accaggaaaggcatgctggatccactggaggtccatctcctcgatttcccaaatatcgtc
atcaagggaagcgaacttcaattgccattccaggcatgtatgaagatggaaaagtttggc
gatctaatcttgagggccacacaaccgcaaatggttctcttcagtctatatgatgattgg
cttaagtccatctcaagttacacggccttctctcgactcattctcctccttcgtggcctt
catgttaacaacgagaaagcaaagatcattctgcatcccgacaaatccacgattacggag
ccccacttcgtatggcctactctgagtgatgaagagtggatcaaggttgaagtcgccatg
aaggagctgattcttgctgactttggcaaacgaaacagtgttaacattgcctctttaacc
gtgagcgaggttcgggacatcattctaggccaggaaattgccgctccttccgtacaacgt
caacaaatggctgaattggagaagagttcagaggcgcaggcccaagtcactgcggttcaa
acccaaactaccaacgttcatggtgacacgattcagaccgttaccaccaccaattacgaa
caacaggtgttcagcagtaaatcggattggcgtgttcgggccatttccgctacacatctt
cccctccgcctccagcacatttatgtgtcgaacgacgatgtgaaagacgacgcggcctct
ttcacatatgtcctacccaagaacatccttcgcgcattcataactgctgcagacctgaga
acacaggtagcagcctacttgtatggtgtctctcccgccgataataagcaggtcaaggaa
atcaaggctgtcgtttgggtcccccaacgaggtagcaataatagtgtggagctgccggcc
caacttcccaaggacgatttcttactcaaggatctcgagcctttgggttggatcaagacg
caggcacttgaaatagctcacctttctccaaccgatgtcacaacgcaagcaaagctcatg
gcggaccatcctgagtggagctcgtcatcgatatgtctgacagcatccttcactccgggg
tctgtttcactatccgcacactccctcaccgttcctggtttcgaatggggtcgaaagaac
caggacaactccgtcaatcctcccggttttaatcccaacatgtcggagagagtacagcta
cttctttctgaccgcattcttggcatgacgcttgttcccgagggacgtgtctggaactac
ggaattggtttgacacaactatggtcaccgaacctcagctattctatgacacttgatact
ccgcttctcttttgggctgaggagcacaggcctgctgcgttcttgagtttcgccaacctg
gaacaagccgaagacagtgcggatgtagaaaatagtttcgcttaa
DBGET
integrated database retrieval system
