KEGG   Laccaria bicolor: LACBIDRAFT_182886
Entry
LACBIDRAFT_182886 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
lbc  Laccaria bicolor
Pathway
lbc03013  Nucleocytoplasmic transport
lbc03015  mRNA surveillance pathway
lbc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LACBIDRAFT_182886
  09122 Translation
   03013 Nucleocytoplasmic transport
    LACBIDRAFT_182886
   03015 mRNA surveillance pathway
    LACBIDRAFT_182886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_182886
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_182886
   03009 Ribosome biogenesis [BR:lbc03009]
    LACBIDRAFT_182886
   03012 Translation factors [BR:lbc03012]
    LACBIDRAFT_182886
Enzymes [BR:lbc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LACBIDRAFT_182886
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LACBIDRAFT_182886
   mRNA cycle factors
    Stress granule specific factors
     LACBIDRAFT_182886
Spliceosome [BR:lbc03041]
 Complex C
  Other components
   EJC/TREX
    LACBIDRAFT_182886
Ribosome biogenesis [BR:lbc03009]
 Eukaryotic type
  90S particles
   Helicases
    LACBIDRAFT_182886
Translation factors [BR:lbc03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    LACBIDRAFT_182886
SSDB
Motif
Pfam: Helicase_C
Other DBs
NCBI-GeneID: 6072664
NCBI-ProteinID: XP_001877097
JGI: 182886
UniProt: B0CY57
LinkDB
AA seq 189 aa
MAAPPGGGLGIIGSGRGATSAETAQAREWKLDALADLFDDVEISHAIVQVGGMTALDSVV
YKLASRGLEAIPLHGDMNAGTKLAALNKFRGTNNVIMRQPTTKALVVYDVQVKGPDVSHI
PLVINYDLPKAVEEYAHRVAPAIASSYSRAGVVVNFVTATGGDVEMLRSIECFYKIKCPE
VPMSLRDIV
NT seq 570 nt   +upstreamnt  +downstreamnt
atggctgcgcctcctggaggcggcctaggtatcattggttctggaagaggagccacgagc
gctgaaactgcccaggctagagaatggaaactcgacgcgctcgctgatctcttcgacgat
gtcgaaatcagtcatgccatcgttcaggttggggggatgacggcccttgactcggtggtg
tataagcttgccagtcgtggattagaagctatccccctccacggcgatatgaacgcagga
accaaactagctgctttaaacaagttcaggggtacaaataacgtcatcatgaggcagcca
acaacaaaagcacttgtagtttatgatgtccaggtgaaaggcccagatgtttcccatatt
ccccttgtcatcaactatgatctcccgaaagcagtcgaggaatacgcccaccgcgttgct
cctgccattgcctctagttattcccgcgcaggcgttgttgttaacttcgttacagcgacc
ggtggggatgtcgagatgttaagatccatagaatgtttctacaaaatcaaatgccccgaa
gtccctatgagcctccgtgatatcgtttaa

DBGET integrated database retrieval system