Laccaria bicolor: LACBIDRAFT_182886
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Entry
LACBIDRAFT_182886 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03013
Nucleocytoplasmic transport
lbc03015
mRNA surveillance pathway
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_182886
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_182886
03015 mRNA surveillance pathway
LACBIDRAFT_182886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_182886
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_182886
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_182886
03012 Translation factors [BR:
lbc03012
]
LACBIDRAFT_182886
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACBIDRAFT_182886
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LACBIDRAFT_182886
mRNA cycle factors
Stress granule specific factors
LACBIDRAFT_182886
Spliceosome [BR:
lbc03041
]
Complex C
Other components
EJC/TREX
LACBIDRAFT_182886
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
Helicases
LACBIDRAFT_182886
Translation factors [BR:
lbc03012
]
Eukaryotic type
Initiation factors
eIF-4
LACBIDRAFT_182886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Motif
Other DBs
NCBI-GeneID:
6072664
NCBI-ProteinID:
XP_001877097
JGI:
182886
UniProt:
B0CY57
LinkDB
All DBs
AA seq
189 aa
AA seq
DB search
MAAPPGGGLGIIGSGRGATSAETAQAREWKLDALADLFDDVEISHAIVQVGGMTALDSVV
YKLASRGLEAIPLHGDMNAGTKLAALNKFRGTNNVIMRQPTTKALVVYDVQVKGPDVSHI
PLVINYDLPKAVEEYAHRVAPAIASSYSRAGVVVNFVTATGGDVEMLRSIECFYKIKCPE
VPMSLRDIV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcctcctggaggcggcctaggtatcattggttctggaagaggagccacgagc
gctgaaactgcccaggctagagaatggaaactcgacgcgctcgctgatctcttcgacgat
gtcgaaatcagtcatgccatcgttcaggttggggggatgacggcccttgactcggtggtg
tataagcttgccagtcgtggattagaagctatccccctccacggcgatatgaacgcagga
accaaactagctgctttaaacaagttcaggggtacaaataacgtcatcatgaggcagcca
acaacaaaagcacttgtagtttatgatgtccaggtgaaaggcccagatgtttcccatatt
ccccttgtcatcaactatgatctcccgaaagcagtcgaggaatacgcccaccgcgttgct
cctgccattgcctctagttattcccgcgcaggcgttgttgttaacttcgttacagcgacc
ggtggggatgtcgagatgttaagatccatagaatgtttctacaaaatcaaatgccccgaa
gtccctatgagcctccgtgatatcgtttaa
DBGET
integrated database retrieval system