KEGG   Laccaria bicolor: LACBIDRAFT_184025
Entry
LACBIDRAFT_184025 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lbc  Laccaria bicolor
Pathway
lbc03020  RNA polymerase
lbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACBIDRAFT_184025
  09124 Replication and repair
   03420 Nucleotide excision repair
    LACBIDRAFT_184025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbc03021]
    LACBIDRAFT_184025
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_184025
Transcription machinery [BR:lbc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     LACBIDRAFT_184025
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LACBIDRAFT_184025
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB GFA C1_1 Lar_restr_allev Zn_ribbon_InsA Zn_Ribbon_YjdM
Other DBs
NCBI-GeneID: 6074503
NCBI-ProteinID: XP_001879099
JGI: 184025
UniProt: B0D4Y9
LinkDB
AA seq 126 aa
MASLHFCSECNNLLYPKADQHRRIMVYACRICQYDEIGENKCVYRNDLLTVTKEQVGVTT
DLGADPTLAHSNILCPRCGHEDAVFYQDQSKRKETRMLLFFVCVKCNHSFTDPTLPSDSR
PDTDDG
NT seq 381 nt   +upstreamnt  +downstreamnt
atggcttccttgcacttttgttctgagtgcaacaacttgctttatccgaaagcggaccaa
caccgtcgcattatggtctacgcttgcaggatatgtcagtacgacgagatcggcgagaac
aagtgtgtgtacaggaatgatctgttgacggtgactaaagaacaagtcggagttacgacg
gatttgggggcggatccaacactcgctcactccaacatcctttgtccccggtgtggtcat
gaggatgctgtattctatcaagatcaatccaagcgaaaagagacgcgcatgctccttttc
ttcgtctgcgtcaagtgcaaccatagctttacagacccaacactgccttcagatagtcgg
cccgacaccgatgatggataa

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