Laccaria bicolor: LACBIDRAFT_184803
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Entry
LACBIDRAFT_184803 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_184803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_184803
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_184803
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACBIDRAFT_184803
Spliceosome [BR:
lbc03041
]
Complex A
U1 snRNP components
U1 related factors
LACBIDRAFT_184803
Complex B
LACBIDRAFT_184803
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
Pre-60S particles
Helicases
LACBIDRAFT_184803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6076295
NCBI-ProteinID:
XP_001880766
JGI:
184803
UniProt:
B0DAJ0
LinkDB
All DBs
AA seq
498 aa
AA seq
DB search
MSNLGGGLRSVDWNSTKLEHFEKNFYIEDKRVAALSDREIEEFRRIKEIKVQGRNVPRPV
VSFDQVGFPEYLMSSIRAQGFDAPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAM
LHINAQPLLAPGDGPIALVLAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRD
LQRGVEIVIATPGRLIDMLETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDR
QTLMFSATWPKDVQKLANDFLRDMIQVNIGSMELTANHNIQQIVEVCSDFEKRNKLIKHL
DQISAENAKVLIFVATKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPI
LIATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGISYTYFTTDNAKSAR
ELIGILREAKATVPPQLEEMSMYGGGGGGRGRYGGGGRGGRGGGGGGGRYGGGGGGGGGY
GGGGGGGYGGRGGGGERW
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccttggaggtggtctgcgctcagtggactggaacagcacgaagctggagcac
tttgagaaaaacttctacatcgaagacaaacgcgtggcagcgctcagtgaccgtgaaatc
gaagagttccggcggataaaggagatcaaagtccaaggccgcaatgttcctcggcctgtt
gtgtcctttgaccaagttggctttcccgaatatcttatgagctcgatacgtgcccaaggc
tttgatgcacccaccccaattcagtgccaggcttggcccatggcattgactggtcgagat
gttgtcgctattgctcaaactggaagcggaaaaacgatttcattcgctcttccggccatg
ttacacatcaatgctcagccattgttggcccctggtgacggtcccattgcgctcgttctt
gcaccaacccgagaactcgccgtacaaatccagcaagaatgcacaaagtttggatcaaat
tctcgtattcgtaacactgccatatatggaggtgctcccaaaggtccacaaattcgcgat
ctacagaggggcgtcgaaattgtcatcgctaccccgggtagactcatcgacatgctggaa
actcaaaagacaaatcttcgacgagtcacctatttggtcatggatgaggctgatcgcatg
ctcgacatgggtttcgaacctcaaattcgaaaaattgttagccaaatccgcccagaccgt
caaactttgatgttcagcgcaacgtggccaaaggatgtacaaaagcttgccaatgacttt
ttacgagacatgattcaagtcaacattggttcgatggagttgacagcaaatcacaatatc
caacaaattgtggaggtttgcagtgacttcgagaagcgaaataaactcatcaagcacctc
gaccaaataagcgcggagaatgcgaaagtgctaatattcgttgctacaaagcgtgttgca
gatgatatcacgaaatatttgcgtcaggatggatggccagcgcttgccatccatggggac
aaagagcagcgtgaacgtgactgggttttaggcgagttcaaggctggtcgttcacccatt
ctcatcgcgacagatgtagcttctcgcggacttgacgtcaaagatgttggctatgtcatc
aattatgatttccctaataactgcgaagattacattcatcgtattggacggactgggcgt
gcaggcatgaaaggcatatcatatacctactttacaacggataacgcaaaatctgcacga
gaactcattggcattcttcgggaagcaaaggccaccgttccaccgcagctagaggagatg
tccatgtacggtggcggtggaggcggacgaggtcgttatggaggtggtggtcgtggtggt
cgtggaggcggcggtggtggtggaagatatggtggtggtggtggtggcggcggtggatat
ggaggcggaggcggcggtgggtacggagggcgaggtggtggtggtgaacggtggtag
DBGET
integrated database retrieval system
