Laccaria bicolor: LACBIDRAFT_184863
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Entry
LACBIDRAFT_184863 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_184863
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_184863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_184863
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_184863
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACBIDRAFT_184863
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LACBIDRAFT_184863
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LACBIDRAFT_184863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
6076499
NCBI-ProteinID:
XP_001880896
JGI:
184863
UniProt:
B0D9Z5
LinkDB
All DBs
AA seq
769 aa
AA seq
DB search
MDQDFSWLHLKPDHASRPLWISPEDGHIILEAFSPIAEQAQDFLTAISEPVSRPAFIHEY
KLTSYSLYAAVSVGLQTEDIIEVPVPDSITSFIRERTLSYGKVKLVLKHNKYFVESSHPE
TLQLLLKDKVIREARLFSVQADSSIKSATFTTSKAPVRGNLVIPGTKEAEKKGDTITNKF
GIPGGPTPHGASDAELFTSVVGVDADEIDEDDENVHAFEIHDAKIDDVKKRCNELEYPML
EEYDFRNDTVNANLDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGIT
AACTIKKSCLVLCTSSVSVMQWKQQFMQWSNVTDRQIAVFTADQKEKFAGDSGIVVSTYS
MVANTHNRSHESKKMMEFLTSREWGFILLDEVHVVPAVMFRRVVTTIKAHSKLGLTATLV
REDDKIADLNYMIGPKLYEANWMDLAAKGHIANVQCAEVWCPMTPEFYREYLREQSRKRM
LLYCMNPNKFQACQFLVKYHEGRGDKVIVFSDNVYALEAYAKRLHKLYIHGGTSQVERMR
ILQWFQHSPEVNTIFLSKVGDTSIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRND
EGFNAFFYSLVSKDTQEMYYSTKRQQFLIDQGYAFKVITHLDGLEDLPDLVYKTRDEQIE
LISSVLLANESEADLGSDIRAAEGDLAGTVTSKDFGPAGPSRFPTAHRTTGSLTALSGAQ
HMSYIEQNKSANKKLAREAAPRHKLFAKRDKEKAAAKKEAKEARARVQD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagacttttcgtggttgcacctcaagccggaccacgcttctcgtcctctatgg
attagtcccgaagatgggcacattatcctggaagctttttcgccaatcgctgagcaagct
caagacttcctcaccgccatcagtgaacccgttagcagaccggcgtttattcatgaatac
aaactcacgtcctactccctgtacgccgctgtttctgttgggctccagacggaagatatc
attgaagtccccgttccagacagcataacgtctttcattcgcgagcgcactctaagctac
ggaaaagtcaaacttgtattgaaacataacaaatatttcgtggaatcaagtcaccctgaa
acacttcagctattgctgaaggacaaggtcattcgtgaagctcgtttgttctctgtccag
gccgatagcagcattaaaagtgctacttttacgacatctaaagcccccgtcagaggcaac
ttggttattcctgggacgaaggaagcagaaaagaaaggtgacacgatcacgaacaaattt
gggattcctggcggtccgacgcctcatggcgcgagcgatgcggagctattcacctcggtg
gtgggtgttgatgcggatgaaattgacgaggatgacgagaacgttcacgcctttgagatc
cacgatgcaaaaattgacgatgtcaagaagcgttgcaacgagcttgaatatccgatgctg
gaggagtacgacttccggaacgatacggttaacgcaaatctcgacattgacttgaagcct
gcaactgtcattcgaccatatcaagagacaagcttgagtaagatgttcggtaatggtcgt
gctcgctctgggattatagtgcttccttgtggagcgggaaagacgcttgttggtatcacc
gctgcatgtaccattaaaaagtcgtgtctggtactctgcacttcctctgtttcagtgatg
cagtggaagcagcaattcatgcaatggtcaaatgtcaccgatcgacaaattgcggtgttc
acagcagatcagaaggaaaagtttgctggggacagcggaattgtcgtgtcgacatactcg
atggtagcgaatactcataacagatcccatgaatctaagaagatgatggagttcctcacg
tcgagggagtggggctttatcctcctcgatgaagttcacgtagttcctgcagtgatgttt
cgccgagtggtcacaaccattaaggcgcactcaaaactcggccttacagccacccttgtc
cgcgaggatgataagatagcagacctgaattacatgattggaccgaaactctatgaggct
aattggatggatctcgccgcaaaaggacacatcgcaaatgttcagtgtgcggaagtatgg
tgtccaatgacaccagaattctaccgggagtatctccgggagcagtcacgaaaacggatg
ttattatattgcatgaaccctaacaagtttcaggcatgccaatttctcgttaagtaccat
gaaggcagaggagataaggtcattgtgttttctgacaacgtctacgctttggaggcatac
gcaaagcgcctgcacaaattatacatccatggtgggacaagccaggtagagcgcatgcgg
attttgcaatggttccaacacagtcccgaagtcaacacgattttcttgtccaaagttgga
gatacatcaatcgacttgccagaagccacatgtctcatccagatatcatctcattttggg
tcacgtcgtcaagaggcccagcgcttgggtcgtatcctccgcgctaaacggaggaatgac
gaaggattcaatgcatttttctactcactagtctccaaggacacacaagagatgtattac
agcactaaacgccaacagtttctaattgatcaaggctatgctttcaaagtcataactcat
ctcgatggtcttgaagacctcccagatctggtctacaaaactcgggacgaacaaatcgag
ctcatatcctcagtgttgctggctaacgaaagcgaggcagatctgggatcagacattcga
gcagcagaaggagacctggccggcacggttacatccaaagatttcggtcctgccggacct
agcaggttcccaactgcccatcgcaccacaggctccctcacagccctcagcggtgctcag
catatgtcttacatcgagcaaaataaatcagcgaataagaaactggcacgcgaagcagct
ccccgacataaactttttgccaagcgcgataaagagaaggctgcagcgaagaaggaggct
aaggaagcacgggcgcgggtacaggactga
DBGET
integrated database retrieval system
