KEGG   Laccaria bicolor: LACBIDRAFT_184892
Entry
LACBIDRAFT_184892 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lbc  Laccaria bicolor
Pathway
lbc03020  RNA polymerase
lbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACBIDRAFT_184892
  09124 Replication and repair
   03420 Nucleotide excision repair
    LACBIDRAFT_184892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbc03021]
    LACBIDRAFT_184892
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_184892
Transcription machinery [BR:lbc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LACBIDRAFT_184892
  RNA polymerase III system
   RNA polymerase III
     LACBIDRAFT_184892
  RNA polymerase I system
   RNA polymerase I
     LACBIDRAFT_184892
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LACBIDRAFT_184892
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1 R3H
Other DBs
NCBI-GeneID: 6076497
NCBI-ProteinID: XP_001880653
JGI: 184892
UniProt: B0D9Y7
LinkDB
AA seq 208 aa
MSDVDETAKLWKVNRTIHELVKDRGFLVSDDEIHMDLQRFRSLYANNSGVVDRNQLNFYT
TSRTNSTDQIFVFFSEEKSVGVKTMRKLLGILEEKSIQRGIIVFPGNMTPSARKVIVAMA
QQYRLEEFSEADLLVNIVHHTLVPRHDVLSPDEKKTLLEKYRLKETQLPRIQLADPVARY
YGLRRGQVVKITRPSETSGRYASYRICF
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagcgacgttgacgaaaccgcaaaactatggaaagtgaacagaacgatccacgaactc
gtgaaggacagaggctttctggtctcagacgatgaaatccacatggacctgcaacgcttt
cgctcgttgtatgccaacaacagtggcgtcgttgaccgtaaccagctgaacttttatacc
acctctcgcacaaattcaacagatcagatattcgtatttttttcggaggagaaaagtgtg
ggtgttaagacgatgagaaaacttcttgggatccttgaagaaaagtcaatacagcggggt
atcattgtctttccaggcaatatgactccttcagcgcgcaaggtgatcgttgcaatggca
caacaataccgactagaggagttttcggaggctgatctattagtcaacatcgtccaccac
acgttggttccgcggcatgatgttttgagcccagacgagaagaaaaccctactcgaaaaa
taccgactgaaagaaacccaattaccccggattcaactagcggatccagtcgcacgatac
tatgggcttcgtcgaggacaagtcgtcaaaatcactagacctagtgaaacaagcgggcgg
tatgccagctaccgaatatgcttctag

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