Laccaria bicolor: LACBIDRAFT_185417
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Entry
LACBIDRAFT_185417 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
lbc
Laccaria bicolor
Pathway
lbc04142
Lysosome biogenesis
lbc04144
Endocytosis
lbc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LACBIDRAFT_185417
04142 Lysosome biogenesis
LACBIDRAFT_185417
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LACBIDRAFT_185417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_185417
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbc04147
]
LACBIDRAFT_185417
Membrane trafficking [BR:
lbc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
LACBIDRAFT_185417
Exosome [BR:
lbc04147
]
Exosomal proteins
Proteins found in most exosomes
LACBIDRAFT_185417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_14
TPR_PEP5_VPS11
VPS18_solenoid_2nd
Motif
Other DBs
NCBI-GeneID:
6079273
NCBI-ProteinID:
XP_001883636
JGI:
185417
UniProt:
B0DI85
LinkDB
All DBs
AA seq
1680 aa
AA seq
DB search
MAAVDSSKPIAFCEHLQLSSLGVQPASISFQTLTLESDHFICVREKINEQNQVVIIDLAD
ANNVLRRPISADSAIMHPSQKILALKAARTLQIFNIETKQKVKSHVNSEDIVFWKWVNET
TIGMVTESSVFHWTISDPTSPPQKIFDRHPTLAGAQIINYRVTSDEKWLVLIGISGNTTN
PSAFKVKGSMQLYSRERGVSQPIEGHAASFAEIKLDGHQNPTKLFTFAVRTATGAKLHVV
EIDHQSPDPPFTKKNVDVYFPPEATNDFPVAMQVSKKHGIIFLVTKYGFIHLYDLETGAC
VYMNRISGETIFVTAEHEATNGIIGVNKKGQVLSVNVDEQTIIPYILTTLNNTELAFKLA
SRANLPGADDLYIKQYQQLFQSGQYGEAAKVAANSPRGILRTVAVIESFKSAPTPPGGLS
PILQYFGILLEKGELNHLESIELARPVLQQGRKQLLEKWLKEHKLTCSEELGDIVRLHDM
NVALSVYLRANVPNKAIACFTETGQTDKIVRYAKTVGYTPDYVALLQHIMRTNPDKGAEF
AAQLVNDDSGPLVDVERVVDIFISQNMIQPATSFLLDALKDNKPEQGHLQTRLLEMNLVH
APQVADAILGNEMFTYYDRPRIANLCEKAGLLQRALEHYEDIADIKRAIVHTTGLQPDWL
VNYFSRLTTAQSMACLQEMLRVNIRQNLQVVIQIATKYSDILGPVKLIEMFESFKSFEGL
YYYLGSIVNLSEDPEVHFKYIQAATRTGQIREVERICRESNFYNPEKVKNFLKEAKLTDQ
LPLIIVCDRFDFVHDLVLYLYQNGLTKFIEVYVQRVNSVRTPQVVGGLLDVDCDEMTIKG
LLASVTGNFPIDELVHEVEQRNRLKLILPWLETRVQAGSQDPAVFNAVAKIYIDSNNNPE
QFLKENNLYEPLIVGKFCEARDPYLAYIAYAKGFCDEELISITNDNSMFKQQARYLIKRR
QPDLWAQVLVADNMHRRALIDQIVATALPECTDPDDVSITVKAFLQADLPIELIELLEKI
IIEPSPFSDNKNLQNLLLLTAIRADKGKVVGYINKLQNYDAAEIAKIATEHSLYEEALTI
YKKHEQHAMAINVLVEHIVSIDRGLEYANKVNQTEVWSRLAKAQLDGLRIKDSVDSYIKA
QDPSNFSEVIEIANHAGKHDDLVRYLQMARKSLREPKIDTELAYAYAKTDRLHDMEDFLG
MTNVADILEVGEKCFEDELYQAAKLLFTSISNWARLATTLIYLGENQSAVESARKAGNTQ
VWKQVHAACIEKSEFRLAQICGLHIIVHAEELSALIQLYERRGHFEEIISLLEAGLSLER
AHMGIFTELSILLSKYKPAKLMEHLKLFVSRINIPKVIKATEKAHLWPELVFLYIKYDEF
DNAALAMIERSSDAWEHNQFKEVIVRAANVEIYYKALSFYLQEQPTLLTDLLSVLIPRID
HSRVVRMFRPMDHIPLLRSYLIAVQHLNIEAVNDAYNDLLIEEEDYNTLRDSIDSFDNFN
NISLAKRLEKHELLEFRRLAAHLYKKNARWEESISLSKQDKLYKDAMVTAAVSASTEVAE
ELLSYFVDIGNKECFAALLYVCFDLLRSDIVEELSWQHGLTDFYMPYKIQVQRSLVEKLA
QLEKEVKERSKKDAQKEQTESEAPIINPGGFGSTLLLTNGFVGQAPPVNGIPYAMTGFGH
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtggactcctccaagcccatcgcattctgcgagcatcttcaactttcaagt
ttgggcgttcaaccagcctccatttcattccagactttgacactcgaatctgatcatttc
atttgcgtacgagaaaaaatcaatgaacagaaccaagtcgtcatcatcgacctcgccgat
gccaacaatgtcctacggcggccaatctccgccgactctgccattatgcacccctcacaa
aagattcttgctctgaaagctgctcgcacattgcaaatatttaacattgagaccaagcaa
aaggtcaaatctcatgtcaacagcgaggacatcgtgttctggaaatgggtcaatgaaact
accattggcatggtcaccgaatcatccgtgttccactggaccatctccgaccccacatcc
cctcctcagaagatctttgaccgccatcctactctcgctggagcccaaataatcaactac
cgcgtcacatctgatgagaagtggctagtcctcattggtatctctgggaacacaacaaac
ccatccgcattcaaggtcaagggctcaatgcaactttacagccgggaacgcggtgtcagt
caaccaatcgagggacacgccgcttccttcgccgagataaagctagacggccaccaaaat
cccacaaagctctttacattcgctgttcgcactgctacaggggcaaagttgcacgttgtc
gagattgatcatcaatcccccgatcctccgttcactaagaagaatgtcgatgtctacttc
ccacccgaggcgaccaacgatttccctgtggctatgcaggtatccaagaaacacggcatc
atctttctggtcacgaagtatggattcatccacttgtacgacctcgaaactggtgcttgc
gtatacatgaaccggatttctggcgagacgatatttgtcacggcagaacatgaagctacg
aacggcatcatcggtgtcaacaagaagggtcaagtgcttagcgttaatgttgacgagcaa
acgatcattccttacatattgacaacattgaacaacaccgaactagcattcaagctggcc
agtcgtgcaaatcttcctggtgcggatgatttgtacattaagcaataccagcaattgttc
cagagtggacagtatggcgaggccgccaaggtcgccgctaactcaccccgaggaatccta
cgcacagtcgctgtcattgaatcattcaagtcggcacctacgccacctggtggactctcc
cccatcctgcaatactttggtatcctcctcgagaagggtgaactaaatcatctagagtct
attgaacttgcgcgacccgttctccaacaaggaagaaagcaactcttggaaaagtggttg
aaggagcacaaattgacatgcagcgaggaacttggtgacattgtacggcttcatgacatg
aacgttgccctcagcgtttacctacgtgccaacgttccaaacaaagccatagcttgcttt
accgaaaccggtcagactgacaagatcgtgcgctatgcaaagacagtgggatatacaccc
gattatgttgccttgcttcaacacatcatgcgcaccaaccctgacaagggtgcggagttc
gctgctcagttggtgaatgacgattctggtcccctggttgacgtcgaacgggtggtcgat
atctttatttctcagaatatgatccaacctgcaacttcattcttattagatgcactcaaa
gacaacaagcccgagcaaggtcacctacaaactcgtcttttggagatgaatcttgtccac
gcgcctcaagttgctgacgctattctcggaaatgagatgttcacctactacgataggcca
aggattgccaacctttgcgagaaggctggtttgttacaacgggcgcttgaacactacgag
gatatcgcggatatcaagcgtgccatcgttcatactactggtcttcaacctgactggctt
gtcaactacttcagtcgcctgaccacggcgcaatccatggcctgtttacaagaaatgctt
cgggtcaacatccgtcaaaaccttcaagtcgttatccaaattgccacgaagtactctgac
attcttggaccagtcaaacttatcgagatgttcgagagcttcaagagcttcgaaggcctg
tattactaccttggctctatagtcaatctgtctgaagatccagaggtccacttcaaatac
atccaggctgctacccgtactgggcagatccgcgaggtcgaacgcatttgcagagaaagc
aacttctacaacccggagaaggtcaagaacttcctcaaagaggcgaagcttaccgatcaa
ctcccccttatcattgtctgcgaccgcttcgacttcgttcacgacctcgttctctacttg
tatcagaacggcctcaccaagtttatcgaggtctacgtgcagcgcgtgaactcggtcaga
actccccaggttgttggtggtctgttggacgttgactgcgatgagatgaccatcaagggt
ctcctcgcctcagtcactggcaatttccccatcgacgagcttgtccatgaagttgaacaa
cgcaataggctgaagttgatccttccttggcttgaaactcgtgttcaagctggcagccaa
gacccagcggtgttcaatgccgtagcgaagatctacattgacagcaacaacaaccccgaa
caattcctcaaagaaaacaatctttatgaacctttgattgttggaaagttctgcgaagct
cgggatccctatttggcgtatattgcctacgcgaaaggtttctgtgatgaagagttgatt
tcaatcacaaatgacaactccatgttcaagcagcaagcacgttacttgatcaagcgtcgc
cagcccgacctttgggcacaggttctcgtcgcggataacatgcatcgtcgggctcttatt
gatcaaatcgtggcgactgcccttccagagtgcacagatcctgacgatgtttcgatcacc
gttaaggccttcttgcaggcggatctgccgatcgagctcattgagttgctggagaagatc
atcatcgaaccgtcacccttcagtgacaacaagaatttgcagaaccttcttctcctcact
gctattcgcgcagacaagggcaaggttgttggttatatcaacaagctccagaactacgac
gctgccgaaatcgctaaaattgcgacggaacacagtctctacgaggaggctttgacaatt
tataagaagcatgagcagcatgcgatggcgatcaacgtgctggttgagcatattgtgtcg
attgatcgtgggcttgagtatgccaacaaggtcaaccaaacagaagtctggagcagactt
gccaaggcgcagcttgatggtctgcgtatcaaagactccgttgattcttatatcaaagca
caagatccctctaacttctcagaagtgattgagatcgccaatcacgctggcaagcacgac
gacctcgttcgttaccttcaaatggcacgcaagtctcttcgcgaacccaagattgacaca
gaacttgcctacgcatacgccaaaaccgaccgtctgcatgatatggaggacttcctgggc
atgaccaatgtcgcagacattctcgaagtcggagagaagtgcttcgaggatgagttatac
caagccgccaagctgttgttcaccagcatctcgaattgggcccgtttggcaacgactttg
atttatctcggagagaaccaatctgctgtggagagtgcccgcaaggctgggaacacacag
gtttggaaacaagtccacgctgcttgcattgaaaaatccgaattccgattggctcaaatt
tgtggtctacacatcatcgttcatgctgaggaactcagtgctctcattcaactttacgaa
cgtcggggtcactttgaggaaatcatcagccttctggaagccggattaagcttggaacgc
gcgcatatgggtatcttcaccgagctgtcgatcctgctcagcaagtacaagccagcgaaa
cttatggaacacttgaagctgttcgtttctcgcatcaatattcccaaggttatcaaggca
acggaaaaagcgcacctttggcccgaactcgtgttcctttacatcaaatatgatgagttt
gataatgctgctctggccatgattgaacgctcttctgacgcttgggaacacaaccaattc
aaagaagtcatcgttcgggcagcaaacgtggagatatactacaaggcattgtcgttctac
ctccaggagcagccaacgctgttgacagatctgcttagcgttctcatcccgcgtatcgat
catagtcgtgtcgttcgtatgttccgcccaatggaccacattcccctccttcgttcgtat
cttatcgccgtacaacatctcaacattgaagctgtcaatgatgcatacaacgacctcttg
attgaggaagaagattacaacacactccgtgattctatcgacagcttcgacaacttcaac
aacatcagccttgctaaacgcttggagaaacatgagcttcttgaattccgcagacttgct
gctcatttgtacaagaaaaacgcgcgatgggaagagtcaatatcgctctcgaaacaagac
aaattgtacaaggatgcaatggtcaccgccgctgtttcggcatcgacagaggttgccgag
gagctactttcatatttcgtggacattggaaacaaggagtgttttgccgctctcctatac
gtctgcttcgatctcctccgctccgacattgtggaggagctctcatggcaacacggcctc
actgacttctatatgccttacaaaattcaagtgcaacggtcgctggtggaaaaattggct
cagcttgagaaggaagtcaaggagcggtcgaagaaggatgcacaaaaggagcagacagag
tctgaggctcccatcatcaaccctggtggctttggtagtacattgctgttgacgaacggt
ttcgttggtcaagctcctccggtgaatggcattccatatgccatgactgggtttggtcat
tga
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integrated database retrieval system
