Laccaria bicolor: LACBIDRAFT_187086
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Entry
LACBIDRAFT_187086 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_187086
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
Other 90S particles
LACBIDRAFT_187086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_PRP39_N
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
6069146
NCBI-ProteinID:
XP_001873977
JGI:
187086
UniProt:
B0CR68
LinkDB
All DBs
AA seq
1468 aa
AA seq
DB search
MPAQKRSMENESTKNGSKKLKIADSKHERHTPSSGAPLRAEELDFPRGGGTSFTPLEVKT
IRAEAVKEANVELFEVRISFSYAKDTHVAKKSKKRKRGPDGHTHPAGENANRVRIEHLNY
KRLNVGMKIFGQIVGILPLSLLVSLPNQLSAHVPITNISSQFTSALERMDNISEGSGADD
EEGAGLSDSDTPDLSDIFRVGQYVRAVVSAIHAPGSSEASSLGKSRDETSKASRRVELSL
VPERVNAGVQKADLKNGFTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIAL
DVGRLLDVSVTKLSANGRTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLITAIHPTG
LNLQVLGFFEGTVDPVHLKKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNLSAP
CIKSKELPAETKSIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHV
PSLSSTGPWKPGTLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDVEVGEVIKGTIKK
LTDSGLFVSLSRSIDGVVWPNHYADITLKHPEKRFKPGAGIKCKVLAVDVYRKRISLTAK
KTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKL
SDSFPIGRVVRTRIISVDTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISEIHKD
NALIILQPTQIRALLSLKNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVVIVAN
TPKKVPLLKGSSVSIDSLKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDYDMG
LVLPPVDSILRAAIIEIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRG
SIKSVADHGLFVTIGRDIDARVQIRELFDDFVEDWKARFQEKQIVKGLILSVDLQTRKVE
MTLKSGDLSTRNGSSVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDS
QGAGVSFALNSFHEGDRVKAVIIGIDKARISLSLKPSLFNEEDFQEGADTNEPIPEPSGV
IKNDNVETSDDDEDEEVDISDSEGEGDDVMDVDIDQPLAHSRPVSAQKPRVVSTAPIPSL
ALSGGFQWSFGEQQLGDDYDAESPSSESDLEGDEYGKRKTKRRRKAIEHDLTAEMHTKSP
ESNADFERLLLGSPNSSYLWIQYMSFQLQLSEVEKSREIGRRAIETINFREEQEKLNVWI
ALLNLENVYGTLESLETTFKQAARANDSKTVHLRLASIFDQSDKLEKAEEQFNRTCKKFG
QSSKVWTLFSEYYLKRGNMEESRKLLPRSLLSLDKRKHLKTISRFAQLEYKYGDPERGRT
LFEGIVDSHPKRWDLWSIYMDMEGVQKNIQGLRNLFERVLTLHMTSHKAKSFFKKWLELE
KRIGDEEGVSDVKTKAVEWTRRASNAQQ
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcagaagcgttccatggagaacgaatcaacaaagaacgggtctaaaaaatta
aagatcgctgattccaaacacgagagacacaccccttcaagtggggctccgttacgtgca
gaggagcttgactttccccgtggtggcggcacgtcgttcacaccccttgaagtaaagaca
atccgagcggaggccgttaaggaagccaatgtagaactttttgaggttagaatcagtttt
tcatatgcgaaagatacccatgttgcgaaaaagtccaaaaaacgaaaacgtggccccgat
ggccacacccaccccgctggtgagaatgccaatagagtacgaatcgagcatctgaattat
aaaaggttaaatgtggggatgaaaattttcggccaaattgtcggtattttgccgttatcg
ttgcttgtttctcttcccaaccaattatccgcccatgttcccataacaaatatatcctcg
caatttacgagcgcccttgaacgaatggacaacatcagcgaagggtctggcgcggatgat
gaggaaggagctggactatcggattctgataccccagatctctctgatatattcagggta
ggacaatatgtccgtgcggtggtgtccgctatacatgccccgggctcaagtgaagcttca
agtcttggaaaatcgcgggatgagaccagcaaggctagccgacgggtggagctcagtctg
gttcctgaaagagtaaatgccggagttcagaaagcagacctcaaaaacggatttaccatg
acagccgccgtcaagagcgtcgaagaccatggatatattttggatttgggaatttcaggt
gtcgaaggatttttggctttcaaggatacaaagatgcggccaagtgggagcatagcgttg
gatgtcggtcggttgctggacgttagtgtaaccaagctgtccgcaaacggacggacttgt
aatgtcactacggaccaagctctattttcgtcgtcctatgtcactgagatgtcatccgtc
acatcggtccttcctggcgctttagtgcaatcactcataactgcgatccatcccacaggt
cttaatcttcaagtccttggttttttcgaaggtaccgttgacccagtgcatttaaaaaaa
ggggggaaagcgtaccaggttggtaaaaaggttagggcgagaatattgtatgaatattct
tcatcccccccaagattcgcgttagccctagtagaccacctcacgaatctcagtgcaccc
tgcatcaaaagcaaggaattaccggctgagacaaaatctattcaagaagcctttccattg
ggtacgatcattgagtctgcgaaggtcctccgggtggaaacggagcgggggatcattgtt
gaagttcagccaggagtcgaaggttttgtacatatatcccacctctcagaggaccacgta
ccatctctttcttccactggcccatggaaacccggcacccttcatcgagcacgtgtaaca
ggctactttagctttgatggtctcttgcagctctccttcaagccatcgatcattgagcag
aagtttttgcaagtgagcgatgtcgaggtcggcgaagtcatcaaaggcacaatcaagaaa
cttaccgattctggcctcttcgtctccttgtcgagaagtattgatggtgttgtctggccc
aaccattatgcggatatcacccttaaacatcccgaaaagcgatttaagcctggagcgggc
attaaatgcaaagttctggccgtcgatgtctaccggaaacgcatttctttaacggcaaaa
aagacgctcctcgattccaacctacccattttgtcaaaaattgatgatgccaaaccaggc
ttcgtgactcacgcagtgatcttcaaagtatacggcaatcacctactggttgaattttac
aataatctaaaagcaattgtcccagcaaaagaaatcagtgacattccgatcaataaactc
tcagattctttcccaattggacgggttgtgagaacacggatcatttctgtcgacactgaa
cagggacggattgtagcgagcattcgacaagccctcggcaacaaagatccagtcagtgac
atcagcgctgtcgagatcggtaatatcgtgaaaggatccatctccgagattcacaaggac
aacgctcttatcatccttcaaccaacccagattcgagctttgctgtctctaaaaaacctg
gcaaattttcgtcaaatttctttgggtgaactccttgtcaagttaaaagttggtgatgaa
ctggatgaactcgttgttgtcacccgaaatcccgataaaggagtggtcatcgtggctaac
acacccaagaaggtcccgttgcttaaaggatcaagtgtgtccattgattctttgaaagtc
ggtcagatcgtcggaggtcgtgttactcgacatactcgccatagcgccttaatcaaggtc
actccacaaattggcggaacattacacccgacagacatatcggatgactacgacatgggc
ttagtactccctcccgtagattccattctgagggccgcgatcatcgagatagatcggtcc
aaaaaccaactcaggctgtccacccgccattcgaaaatgtatcctgaatctaccaaaaaa
attgttgaccaggagatcatccatatctttgatatccatgtcggagacactgtccgagga
tcaattaaaagtgtggctgaccacgggttgttcgtgaccatcggtcgtgatatcgatgct
cgtgtacagattcgagaactttttgacgactttgtcgaagactggaaggctcgcttccag
gaaaaacagatcgtgaaaggtctcattctcagcgttgacctccagacaaggaaagtagaa
atgaccctcaaatcgggagatctctcgactagaaatggttcatccgttgggttggctgat
ctcaaagtgggtcagaaggtcgatggccttgtaaagcggattgaggactacggtctgttc
atcaacatcgatcgttcaaagcttaatggtctttgtcacaaatcacagctctcagacagt
cagggagctggtgtctcatttgcgctcaatagcttccacgagggagatcgtgtgaaggcc
gtgattatagggattgataaagctcgtatctctttgagcctgaagccttctcttttcaat
gaagaagattttcaagagggcgctgacaccaacgaaccgatccccgaaccttctggagtg
atcaagaatgacaacgtcgagacaagcgatgatgacgaggacgaagaagtcgacatctcg
gactccgaaggcgagggcgacgatgtgatggatgtcgatattgatcaacccctggcccac
agccgtccggttagcgcacagaaacccagagtcgtctccacggccccaataccttcattg
gcgttgtcaggcgggttccaatggtcttttggtgaacagcaattaggcgatgattacgat
gcggaatcaccctccagcgaatctgacttggaaggtgacgaatatggcaagaggaaaacg
aagcgtcggcgaaaagcgattgaacacgacctcacagcagaaatgcacaccaagtcaccg
gagtccaacgcggactttgagaggctgcttctggggtctccgaattcgtcgtacctttgg
atacagtatatgtcctttcagctgcaactctcagaagtggagaagtctcgagaaattggc
cgcagggctatcgaaactattaactttagggaagagcaagagaaactgaacgtgtggatc
gccctgttaaacctggaaaatgtttatggcaccttggaaagtttggaaacaacctttaag
caggcagctcgcgcgaatgactcgaagaccgtacatctacgtctggcttcaatcttcgat
caatcagataaattggagaaagccgaagaacaatttaatcggacctgcaagaagtttgga
caaagttccaaggtttggacactcttcagtgaatactacttgaaaagaggaaatatggag
gagtcgagaaagctccttccacggagcctgctgagcctagacaaacgcaaacatttgaaa
acgatatctcgctttgcacaactggaatacaagtatggtgatcctgaaagaggaagaaca
ctgttcgagggcattgttgattcacaccccaaacgatgggacttgtggtcaatatacatg
gacatggaaggggtgcagaaaaatatccaaggcctccggaacctcttcgaacgggttttg
acccttcatatgacaagccacaaagccaaatcattcttcaagaagtggcttgagcttgag
aaacgaataggagacgaagagggtgtaagtgatgtgaaaacaaaagcagtcgagtggaca
cgaagagcatcaaatgcacaacaataa
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integrated database retrieval system
