Laccaria bicolor: LACBIDRAFT_187856
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Entry
LACBIDRAFT_187856 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lbc
Laccaria bicolor
Pathway
lbc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LACBIDRAFT_187856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_187856
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_187856
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_187856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbc04147
]
LACBIDRAFT_187856
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LACBIDRAFT_187856
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LACBIDRAFT_187856
Membrane trafficking [BR:
lbc04131
]
SNARE
SNARE associated proteins
Others
LACBIDRAFT_187856
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LACBIDRAFT_187856
Exosome [BR:
lbc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LACBIDRAFT_187856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
CDC48_2
AAA_5
AAA_2
AAA_16
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_28
Mg_chelatase
Parvo_NS1
Vps4_C
AAA_7
nSTAND3
AAA_17
IstB_IS21
AAA_18
NPHP3_N
DUF815
ResIII
AAA_lid_PRS2_C
AAA_24
ABC_tran
Sigma54_activat
PhoH
TsaE
SLFN-g3_helicase
NB-ARC
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
6070487
NCBI-ProteinID:
XP_001875018
JGI:
187856
UniProt:
B0CTA1
LinkDB
All DBs
AA seq
817 aa
AA seq
DB search
MADPSGAAPQPGPNDISTAILRPKKSPNRLIVDEATADDNSVATLNPATMEILQLFRGDT
IIVRGKKRRDTVLICLSSDEVEEGRIQMNKVARNNLRVKLGDIVNVHQCLDIKYGKRIHV
LPFDDSIEGLSGNIFDVYLKPYFLEAYRPVRKGDTFLVRGGMRTVEFKVIETDPSEFCIV
SQETVIHTEGDPVKREDEESNLADVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIK
PPRGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN
SPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPA
LRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLAEDVDLEQIAADTHGYVGSDVASLCS
EAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRFALGTSNPSALRETVVEVPTVTW
DDVGGLEKVKQELQETVQYPVDHPEKFLKYGMSPSKGVLFYGPPGTGKTLLAKAIANECN
ANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGGGGASGDGG
GAGDRVLNQILTEMDGMNTKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPDEPSRL
SILKAALKKSPVAPEVDLSFLAKNTHGFSGADLTEICQRAAKLAIRESIDADIRALREKK
EREEASGDAKMEDDEEEEDPVPQITREHFEEAMKYARRSVSDQDIRRYEMFSQNLQQSRG
FGNNFKFPESDGTAPAGVQASGNAGFAEDNADDDLYA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctagtggagcagcgccccaaccagggccaaatgatatctcaacagccata
cttaggccaaagaaatccccaaatcgtctcatcgttgatgaggcgaccgcagacgacaat
tcagttgcgaccctcaatcctgctacaatggaaatactccaactcttccgcggtgacacg
atcatcgttcgtggcaagaaaaggcgcgacactgttctcatctgtttgagttctgatgag
gtggaggaggggcgtattcagatgaacaaagtcgctcgcaataatttgcgagtgaagctt
ggcgatattgtcaacgtgcaccaatgtctcgatatcaaatacggaaaacggatccacgtt
ctaccattcgacgactctattgagggattgagtggcaacatctttgatgtgtacctcaag
ccttacttcttggaggcctacaggccagtgcgaaagggcgatactttcctcgtccgagga
ggcatgcgaacagtggaattcaaagtcatcgaaaccgacccctccgagttttgtatagtt
tctcaagaaacggtgatccacactgagggtgacccagtgaaaagagaagacgaagagtca
aatctggctgacgttggctacgacgacattggtggatgccggaaacaaatggctcaaatc
cgtgaactcgtggagctgcctttgcgccatccacaactattcaaatccatcggtatcaag
cccccacgcggtatcctgatgttcggtccccccggtactggtaaaaccctcatggcccgt
gcggtagccaatgagacgggcgctttcttcttcctgatcaacggccccgagatcatgagt
aagatggcaggcgagagtgagagcaacctgcggaaagcattcgaggaagcagagaagaac
tcgcctgctatcattttcattgatgagattgattcgattgcgcccaaacgtgaaaagaca
aatggagaagtcgaacgtcgtgttgtttctcaactgctcaccctcatggacggcctcaaa
gcgcgctccaacgttgttgttatggctgccaccaacagacccaattccatcgaccccgcc
ctcagacgttttggtcgtttcgatcgtgaggttgacattggtattcctgatcccactggt
cgtcttgagatcctccgcatccacacgaagaacatgaaacttgcagaagatgtcgacctc
gaacagatcgctgctgacacacacggctacgtcggttctgatgtggcctctctctgctca
gaggctgccatgcaacagatccgagagaagatggatttgatcgacctggacgaggacacc
atcgatgctgaggtgctcgattcgcttggtgtcaccatggataacttccgctttgccctt
ggaacctccaacccctcggctcttcgcgagactgtggtggaggtaccgactgttacttgg
gacgatgtcggtgggctggaaaaggtcaagcaggagttgcaggagactgtgcagtacccc
gtggaccaccccgagaagttcctcaagtatggtatgtccccgtcgaagggtgtcttgttc
tatggtcctcctggaacgggtaagaccctgcttgcgaaggcgattgccaatgagtgcaat
gccaactttatcagtatcaagggtcctgaactgctcacgatgtggtttggtgaatccgaa
gccaatgttcgtgatgtctttgacaaagctcgtgccgccgcaccctgcgtcatgttcttc
gatgagttggactccattgccaaagctcgtggcggaggaggtgcttccggtgatggtgga
ggagctggtgatcgtgttctcaaccaaatattgacggagatggacggcatgaacaccaag
aagaacgtgttcataatcggtgctacgaacagacctgaccaaatcgattctgcgctcctc
cgtcctggtcgacttgaccagctgatttacattcctctccctgatgagccttcgcgattg
tcgattctcaaggctgcgctcaagaagtcccctgttgcccctgaggttgacctttccttc
ttggcgaagaacacgcatgggttctctggtgctgacttgacggagatttgccagcgggcg
gccaagctggccattagggagagtattgatgcggatattagggctttgagggagaagaag
gaacgtgaggaggcttcgggtgatgccaagatggaggatgatgaggaagaggaggaccct
gtgcctcagattacaagagaacattttgaggaagccatgaagtatgctcgtcgatcggtg
tctgatcaggatatcaggcgttacgagatgttctcacagaatctgcagcagtctcgcggg
tttggaaataacttcaagttcccggaatctgatgggacggctcctgccggcgtacaagct
tctggtaatgccgggtttgctgaagacaatgccgacgacgacctctatgcttga
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