Laccaria bicolor: LACBIDRAFT_189521
Help
Entry
LACBIDRAFT_189521 CDS
T01044
Name
(RefSeq) Sec7-like domain is implicated in guanine nucleotide exchange function
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
lbc
Laccaria bicolor
Pathway
lbc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LACBIDRAFT_189521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_189521
Membrane trafficking [BR:
lbc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
LACBIDRAFT_189521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Phage_rep_org_N
Motif
Other DBs
NCBI-GeneID:
6074230
NCBI-ProteinID:
XP_001878298
JGI:
189521
UniProt:
B0D3W0
LinkDB
All DBs
AA seq
1462 aa
AA seq
DB search
MTTPSDLRRGTSNSISSKHVLNSEILSVTSAMRKNSRWASSTLVMGSKDPRPLGSNMGLR
ISTVKEGEDLPILLGPFFAILRSPLSTGPITSAALSALHSFFVCGLISSRSRALYPALAE
LSGTISHCKFEASDSSGDEVVLLRIMTVIQDCLCGGVGRGLGDIEVCEMLETVLTTCCQM
RLSEILRRSAENTMHALVRTVFSKLHSLDAQSEEEKLLAAEEDVSDGDLKMTVSTTESLT
VEGSPEITGDGEVELVHDVAPHSASSVASRPEYGLPSILELLRVLINVLDPNDQQHTDST
RLTVLGILHAALEESGPSIADFPSLKALVVDPGCKFLFQLARSDNTAVLYSALRTISIIF
HAMRKHLKLQQELFLAFTIDRLALPGSNQNNRAPSTIGGSLMKRSPSLRPGTPTASTPLQ
GSADTISAEENLSASSTRAVVPPARGETRDLILETLSDISGHPSFMVDLYANYDCDVNCE
NLFERLVDFLTKGVYPAQNIGSVEAQRHSQYLCLEFLLTFVNDMAMRADGAAEQWPQAEF
LLQAKSQKQLILAGAARFNTKPKSGVTFLEENRLIYADMPPETLRPQSLASFLKGCTRLD
KRLLGDYISKPDNIEVLKAFIGLFDFKDKPIADAMRELLEAFRLPGEAQQIARITETFAS
IYFASEPAEIKSEDAVYVLAYSVIMLNTDLHNPQIRKRMTIEDYQKNLRGVNNGADFSSE
FLQNIYDSIRKREIIMPEEHTGQLGFEYAWKELLARSRNAGEFMVSNSSAFDVEMFKAIW
KPTISAIAYAFITFEDDYIIQRAIAGFRQCATLAGHFQLPDVFDFVVVSLSQATSLLSDS
LPAQIPNYPVIDVEGQSITVSKLSVEFGTNFRGQLAAVVLFNIVNGSGNALREGWVQIFE
MFQNLFMHSLLPTRMLQMEDFLGGVTMIPLRGSQPTRPHLRNEGLLSALSSYLMTPYSNS
PDMQVPDATDADVENTLCTIDCITSCRLDELYSQIVRLDSEAMIAAIRALEALAHERTVA
KLRLQSEDLVPALDEDVYQLPYDPASVFLLETMASIACQAPQYVEDLWPIMFEHLSALLS
NSTQYSALLIERAVVCLLRLCHILAQKPSLRDQVYVSFDLLANLPPTIANSVGEQVVAGV
ILIVRNNRDIISSQTEWNLVFAMLRSTMSHPEAARTSFDLISNLITDGPDMLVSLDNFSG
LVSLLDNFATAASALTESHQHRNRRVEPLTSSNSLIVDRGKKAIELLSTLHKWIALQQSS
EQQSYIWKQLTLPLLTSLGRQSVNAAREIRHTAIGQLQRILLGPSLVSSNVAEQSQVEDI
FNRVIFPLLDDLLRPQVYQRDPQGMAETRLRGSALLCKVFMHLELRETVIQADFRLLWIQ
ILDLLDRLMNADKGDQLYEAIPESLKNVLLVMNAAGILVPHQETDDTQDELHRTLWTATH
ERMERFLPGFLTDVIPSPALAV
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccccctcggacttgcgtcgcggcacatccaacagtatttcttccaaacatgtc
ctcaattcggagattctttccgtcacctcagccatgcgcaaaaactcacgatgggcttct
tcgacgctggtaatgggttccaaagacccacgcccactgggatctaacatgggtctccgg
atatcaacagtgaaagagggcgaggatttgcccattttactaggtccattctttgccatt
cttcgatctcctctctccacggggccaataacatctgctgcgttatctgcacttcatagt
ttcttcgtctgtggtctcatttcgtcacgttctcgggctctttaccccgcgcttgcagaa
ctcagtggcacgatctcgcactgtaaattcgaggcaagcgactcgtccggggacgaggtg
gttcttcttagaatcatgacagtcatccaggactgtttgtgcgggggcgttggaagagga
ttgggggatattgaggtgtgcgaaatgctcgagaccgtgcttaccacctgttgtcaaatg
cgtctcagtgagatactcaggcggtcagcagagaatacaatgcacgcgcttgtaaggacg
gtattttcaaaattacactcattggatgcacaatcggaggaagagaaactcctggccgca
gaggaggacgtttctgatggagatctcaaaatgacggtgtctaccactgaatccctcact
gttgagggttctccagaaattactggcgacggtgaagtggaacttgtgcacgatgttgca
ccccattcggcttcatctgtggctagccgtcccgaatatggtctcccatcaattcttgaa
ctgttacgcgtcctaatcaatgttcttgacccgaatgaccaacaacacacggattccacg
cgtcttacggtccttggtatcctgcacgctgctcttgaggaatctgggccatctatcgct
gacttcccctctctcaaagcccttgtcgttgatccaggctgtaaatttctttttcaactc
gcacggtcggataataccgctgttctctattctgcgcttcgtactatttcgataatattc
catgcgatgcgtaaacatctgaagttgcaacaagagctctttttggcttttaccattgat
cgcctcgcattgcctggttcaaaccagaacaatagggcgccgtcaactatcggtggttcc
ctgatgaagagaagcccttctttaagacctggaacgcccaccgcgtcgacacccttacaa
ggctcagcagataccatttcggcggaggaaaatctgagcgcttcatccacacgagctgta
gttccgcctgctcgtggagagactcgggatctgattctagaaactctcagcgatatctct
ggccatcctagtttcatggtggacctatatgccaactatgactgtgatgttaactgcgag
aatctctttgagcgacttgtggacttcttgacgaagggcgtttatccagcgcaaaatatc
ggtagcgtagaagcccaacggcattcacaatacctttgtctggaatttttgttaacgttt
gttaacgacatggcaatgcgagcagatggtgctgcagaacaatggccgcaggcagaattt
ttgctgcaagcaaagtctcaaaagcagttaatcttggcgggagccgctcgtttcaatacc
aaaccaaaatcgggcgtgactttccttgaagagaataggttaatttatgccgatatgcca
ccagagacattgcggcctcagagtctcgcctcgttcttgaaagggtgcaccagactcgac
aagcgtctactcggcgattacatttccaagccagataacattgaagttctcaaagctttc
attggactgtttgactttaaagataaacccattgcagatgcgatgcgagagcttcttgag
gcatttcgacttcctggtgaagcccaacaaattgcccgaatcacggaaacatttgcatca
atttattttgcttcggagccggccgaaatcaagagcgaggatgctgtatacgttttggca
tattccgtgatcatgctgaataccgatctccataaccctcaaatccgaaaacgcatgacg
attgaagactaccagaagaacttgagaggtgtcaataacggggcagatttttcttctgaa
ttcctgcaaaatatttatgattcgatccgaaaaagagaaatcatcatgccggaggagcat
acaggccaacttggatttgaatatgcatggaaggagctccttgcccgctcgcgcaatgct
ggcgaattcatggtttcaaattcttctgcattcgatgttgagatgttcaaggccatttgg
aaacctacgatatctgccatcgcctatgcttttatcacgtttgaagacgactacatcatc
caacgtgcaatcgccgggtttagacagtgtgctacgttggcggggcatttccaactgcca
gatgtctttgactttgtcgttgtctctctttcccaggcaacaagtcttctctcagattca
ttaccggctcaaattccgaattatccagttatagacgtagaaggccagtctatcacagtg
tccaagctctcagtagaatttggaacaaactttagaggacagctcgctgctgtcgtgtta
ttcaacatcgtcaacgggagcggcaatgccttgcgggaaggttgggtgcagattttcgaa
atgttccaaaacctcttcatgcattctttgttgccaacaaggatgttgcaaatggaggat
ttccttggaggcgtcaccatgatacccctccgtggaagtcaaccaacccgccctcacctc
cggaatgaaggccttctctctgccctgtcttcgtacctaatgacaccctacagcaatagc
cctgacatgcaggtccctgacgcaactgatgcagatgtggaaaacacactttgtaccatt
gattgcatcacatcctgccggctcgatgaactctacagccagatagtacggctagattcc
gaagcaatgatcgcagccattcgtgcactagaggctctcgcacatgaacgaaccgtcgca
aaactgagacttcaatcagaggatctagttcctgctctggatgaagatgtataccaactt
ccttatgatcctgcctccgtattccttctagagactatggccagtatagcgtgccaggca
ccacaatacgttgaagatctatggccaatcatgttcgagcacctatctgcgcttctgtcc
aattcaacgcagtatagtgcgcttctcatagagcgtgctgtcgtctgccttttacgtctc
tgtcatattttggcacagaagccttccttacgggaccaagtctacgtctcgtttgacctt
ttggcgaaccttcctccgacgattgctaattcagttggtgaacaagttgtagctggcgtt
atccttattgtgcgcaataacagagacatcatcagttcacaaactgaatggaacctggtc
tttgcgatgctgcgatcaacaatgtcacatccggaagccgctcgaacgtcgttcgatctc
atttcaaatctaattactgatggacccgacatgcttgtctcattggacaatttctctggt
cttgtttctcttttggacaatttcgcaacggcagccagtgccttgactgagagtcatcaa
catagaaatcgccgggttgaaccattaacatcatcgaattcccttatagttgaccgtggc
aagaaagctatcgaactcctgtccacccttcacaagtggatagcgttgcaacagtcatcg
gagcaacagagctacatttggaaacagcttactcttccccttctcacctccctcggacga
caatcggtcaacgctgctcgtgaaatacgccacaccgcaatcggtcaattgcaacgtatt
ctactgggcccatctctggtatcatcaaatgtcgccgaacaaagccaagtagaggacatc
ttcaaccgtgtaatatttcctcttctggacgacctgttgcgcccccaagtctatcaaagg
gacccccagggtatggctgaaactcgtttacgagggtccgccctgctctgcaaagtcttc
atgcacttagagctgcgggagactgtaattcaggcagacttcaggcttctttggatccaa
atccttgatcttctcgatcgattgatgaatgccgacaaaggagatcaactatacgaggct
attccagaatccttgaaaaacgttcttctcgtgatgaatgctgctgggatcctcgttcca
caccaagaaacggatgatacacaggatgagcttcatcggacattgtggactgcaacgcat
gaacggatggaacgtttcctaccaggtttcctcactgatgtaatacccagccccgccctt
gctgtataa
DBGET
integrated database retrieval system
