Laccaria bicolor: LACBIDRAFT_189645
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Entry
LACBIDRAFT_189645 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lbc
Laccaria bicolor
Pathway
lbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LACBIDRAFT_189645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_189645
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LACBIDRAFT_189645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
6074346
NCBI-ProteinID:
XP_001878953
JGI:
189645
UniProt:
B0D425
LinkDB
All DBs
AA seq
277 aa
AA seq
DB search
MTNAPVQEDGKIYGLVIELMDPNTREGALLELSKKREQYDDLALVLWHSFGIMPALLQEI
VSVYPLLSPPNLTAHVSNRVCNALALLQCVASHSETRQLFLNAHIPLFLYPFLNTTSKTR
PFEYLRLTSLGVIGALVKQNDNNTVIHFLLSTEIIPLCLRIMETGSELSKTVAIFIVQKI
LLDETGLTYICHTYERFYAVGTVLSNMVNQLVETQAVRLLKHVVRCYLRLSDNLRAREAL
RACLPEPLRDQTFNTLLKGDMVTKRCLTTLLNNLNEP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgcccccgttcaagaggacgggaaaatatacgggctggtcattgagttgatg
gaccccaatacgagggagggcgcgttgcttgagctgagcaagaagagagagcagtatgat
gaccttgcccttgttctatggcattcctttggaatcatgcccgctcttctgcaagaaatt
gtctccgtctatcctttgctctcaccgccaaacctcaccgcccacgtctcgaaccgcgtc
tgcaacgccctcgctcttttgcaatgtgttgcgtcacattcagagacccgtcaacttttc
ttgaatgcccacatacctctctttctatatcctttcttgaatacaacatcaaaaacacgc
ccctttgaatacctccgtcttacttctctgggagttataggcgcgcttgtaaaacaaaac
gacaataatactgtaatccacttcttgttatccacggaaataatccccctctgcctccgc
atcatggagactggatcggaactctcaaaaacggtcgctatctttatcgttcaaaagatt
cttttggacgagacgggcctgacgtatatctgccacacgtacgagcggttctacgccgtc
ggcaccgtcctcagcaacatggtcaaccaactcgtcgagacgcaagctgtgaggcttttg
aagcatgttgtgcgctgttatctccggctgagtgataacctgcgggctcgtgaagctttg
cgggcatgtctgccggaaccgctgcgtgaccagactttcaataccctattgaagggcgac
atggtcaccaaacgctgccttacgacgcttctgaataatctcaacgaaccgtaa
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