Laccaria bicolor: LACBIDRAFT_190099
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Entry
LACBIDRAFT_190099 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LACBIDRAFT_190099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_190099
Enzymes [BR:
lbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LACBIDRAFT_190099
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LACBIDRAFT_190099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
6075696
NCBI-ProteinID:
XP_001880038
JGI:
190099
UniProt:
B0D7Q0
LinkDB
All DBs
AA seq
1142 aa
AA seq
DB search
MSALVDEESEWEQLNRTNWRGLGLTDPIKSVEDKWLLLPAFLKVKGLVKQHIDSFNYFVD
IDIKNIVRANNKVTSDVDPRFWLKYTDINVGFPDRNELEAIDKRVTPHECRLRDITYGAP
IVVTIQYTRGKSIVQRNVNIGRLPIMLRSSKCVLTGRTEAQLARMTECPLDPGGYFVVKG
TEKVILVQEQLSKNRIIVETDTVKGVVQASCTSSTHGGLKSKTYVATKKGRIYLRHNSIH
EDVPIVIALKALGIQSDKEILLLTAGTTEAYKNTFSANLEDAAKLGVYTRQQALEYIGSR
VKINRRVMGPRRPAWEEALEALATIVLAHVPVNGLDFRSKAIFVATMTRRVLMAMQDENM
VDDRDYVGNKRLELAGQLLALLFEDLFKTYNSNLKIAIDKVLKKPSRTSEFDAYNTMQMQ
GDHLTSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSG
PRALQPSQWGVLCPSDTPEGEACGLVKNLALMTHITTDVEEEPITRLAFMLGIEDINLTT
GTEIYGPGVFVVNVNGTIIGVTRYPARFVAQFRSLRRARRFSEFVSVYINHHHHAVHIAS
DGGRICRPAIIVENGRPKVASEHMMHLKKGNVTFDDFLRKGLVEYLDVNEENDTYIALYE
SDIVPATTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQMNRIDT
LLYLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALILNKASLDRGYG
RCQVLRKNATLIRKYPNGTFDRLADAPLDENGQLNKKYDIIQSDGLAGVGERVDPGDVYV
NKQSPTNATDNTFTGQAASVPYKNTPLTYKSPVAGNIDKVMISDTENDQTLIKVLIRQTR
RPELGDKFSSRHGQKGVCGLIVNQEDMPFNDDGINPDTIMNPHGFPSRMTVGKMIELLAG
KAGVLAGKLQYGTAFGGSKVEDMSRILIDHGFSYAGKDMLTSGITGEPLEAYVYFGPIYY
QKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLM
ISSDKFEVNACEECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLILD
DA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctcgtggacgaggagagcgaatgggagcagctcaacagaactaattggcgc
ggccttggtctcaccgatcccataaagagcgtagaggacaagtggctattattgcctgcc
tttctcaaagtcaagggtctagtgaagcaacacatcgattcgttcaattacttcgtcgat
atcgatatcaaaaacatcgtccgcgcaaataacaaagtgacttccgatgtcgatccacgg
ttttggttaaaatacactgacatcaatgtcggattccccgatcgcaatgagcttgaagcc
atcgacaagagagtcacaccccacgaatgccggctgcgtgatattacatacggcgcaccg
attgtggtcaccatccaatacacgcgggggaaaagcattgtgcaacggaatgttaacatt
ggccgcctgcccatcatgctgaggagtagcaagtgcgttttgacaggtcgaacggaagca
caattggcgcgcatgactgagtgtcctttggatcctgggggctatttcgtcgtcaaaggc
acggaaaaagtcatcttggtccaagagcagctcagcaagaatcgtataatcgtggagacc
gacaccgtaaagggggttgttcaggcctcctgtacttcttccactcatggtggcctcaaa
tccaagacgtacgtcgcaacgaaaaaaggccgtatttatcttcgacacaactctatacat
gaggacgttccgatcgtcattgctctgaaagctctaggaattcaatcagacaaggagata
ctgttacttacagctggaaccacggaagcgtacaagaataccttttctgccaacctcgag
gacgcggccaagctcggtgtatacacacgacaacaggctcttgagtacattggctctcgc
gtcaagatcaatcgacgggttatgggtcctaggagacccgcttgggaagaggctttggaa
gcgttggctacaattgttcttgcccatgtcccagtcaacggtctcgatttcaggtcgaag
gccattttcgtagctacaatgacccggcgtgttctcatggccatgcaagacgaaaacatg
gttgacgatcgcgattatgtcggaaacaagcgtcttgaacttgcaggccagcttcttgct
ctcctcttcgaagaccttttcaaaacctataactccaatcttaaaattgcaattgacaaa
gtcctcaaaaaaccttcccggacgagcgagtttgatgcgtacaacactatgcaaatgcaa
ggagaccatttaacgtccggcttcgtgcgcgctatatccacaggaaactggtccctcaag
cgttttaagatggagcgtgcaggcgtcacccacgtacttagtcggctaagcttcatctcg
gctttaggcatgatgacacgcatttcgtcccagtttgagaagacacgcaaggtaagcggc
ccgagagctttgcaaccgagtcaatggggtgttctctgccccagcgataccccagaaggc
gaggcgtgtggcctcgtcaagaatttagcccttatgactcacataacgacggatgtcgaa
gaagaacctataacccggcttgcgttcatgttgggtatcgaagacatcaatttgacgacg
ggaacggagatatatggtcctggtgtcttcgtggtgaatgtgaatggaactattattggc
gtcacccggtatccggcgcgatttgtggcacagtttcgaagtcttcgcagagcccggcgc
tttagcgagtttgtgagcgtctacatcaatcatcatcatcacgccgttcatattgccagc
gatggtggccgcatctgccggcctgcgatcatcgttgagaatggacgcccgaaggtcgca
tctgaacacatgatgcatctcaagaaaggcaatgtcacgttcgacgacttccttcgaaaa
ggtctcgtcgaatacctcgacgtcaatgaagaaaacgacacctacattgcgttatacgaa
tctgatattgtgcctgccaccacacacttggaaattgaacctttcacgatactcggcgct
gtcgcagggctcatcccatatcctcaccacaaccaatcgcctcgaaatacataccagtgt
gccatgggtaaacaagctattggtgccatcgggtacaatcaaatgaaccggattgacacc
ttgctgtatttgtctgtgtaccctcaacagccaatggtcaaaacaaaaaccattgaactg
atagggtatgatcgccttcctgccggccaaaatgcgacggtcgcggtcatgagttactct
ggctatgatatcgaagatgctcttattctaaacaaggccagtcttgatcgtggttatggc
cgatgtcaagttttgcgcaagaacgcgaccctcatccggaagtaccccaatggaacattt
gatcggttggctgacgcaccgctggatgagaatggccaactcaacaaaaaatacgacatc
attcaatcggacggtcttgcaggtgtaggagaacgggttgatcctggagatgtatatgtg
aacaaacaatcccccaccaacgccacggacaacacgttcaccggccaagctgcgtccgtg
ccgtataaaaatacccctctgacctacaagtcgcctgttgctgggaacatcgacaaagtc
atgattagcgacacggagaacgatcagacgctcattaaggtgctaatccgccaaacacgg
aggccagagctcggtgacaaattttcgtcgcgccacgggcaaaagggtgtttgtggtctt
attgtaaaccaagaagacatgccgttcaatgacgatggtatcaaccccgacaccatcatg
aaccctcacggtttcccctcccgaatgacagtcggaaagatgatagaactattagcgggc
aaggccggtgttctcgctgggaagctacaatatggaacggccttcggcggatccaaagtt
gaagatatgagtcgcatacttattgatcacggatttagctatgctgggaaggacatgctg
acaagtggcattaccggggaaccccttgaagcttacgtttacttcgggcctatttattac
cagaaacttaaacacatggtgatggataaaatgcatgctcgagcaagaggaccgcgtgcc
accttgacgcgccagcctacagaaggtcggtcccgagaaggtggcttgcgcttgggtgag
atggagcgagactgcctaatcggctatggggcaacgcagctgttgcttgagcggctaatg
atctcttctgacaaattcgaggtcaacgcctgtgaagaatgtgggctgatgggatacaac
ggatggtgtacctactgcaagagctccaagaaaatggcccaattaaccatcccatacgcg
gccaagctcctattccaagagttgatggcgatgaatgttgtgcctcgactaattcttgac
gatgcctaa
DBGET
integrated database retrieval system