Laccaria bicolor: LACBIDRAFT_190662
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Entry
LACBIDRAFT_190662 CDS
T01044
Name
(RefSeq) vacuolar assembling/sorting protein VPS16
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
LACBIDRAFT_190662
04148 Efferocytosis
LACBIDRAFT_190662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_190662
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LACBIDRAFT_190662
Hops complex
LACBIDRAFT_190662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
6076745
NCBI-ProteinID:
XP_001881053
JGI:
190662
UniProt:
B0DBF1
LinkDB
All DBs
AA seq
836 aa
AA seq
DB search
MTEHPTATWQAMQDGNAFYRRQQLYSIPGKLPDFGDYIVAGCQYGGPLALMRDNTKLLAL
GRLTPAAAKAQIQIYSPAGESLLSFSWDQGKIIKFGWTRDETLTVLNEEGIYRLYDLQGD
YQQHSLGPEASELGIIDARIHDNGFVAMTSSLALLEVKGWEGGRPLTLANPALTQPPHAW
CIIPPDLNVSRHVEVLLSVESTIYTVDNLESVDQRLSRGPFTHVSPSPNGKLLALLTFSG
TLWVVSSDFQRNIAEFDASSVPEAEGNVLQVEWCGNDAIAVAWKFLVLLVGPSGDTLQYA
YSGTPFAVTEMDGVRIMSPDICDLLQKVPASTSSIFRPGSTSPSAILYDAWESFSSRSPK
ADESIRSIRPDLAKAVDECIDAAGQEWEPQLQRKLLNAAKFGRSFLDFHNPTDFVNMGQT
LKVLNAVRFYEVGIPLTYSEHNYASPSHLISRLTSRNLHLLALRISSFLSLKPDIVLKHW
ACAKILRDAELTADDEVCKLIVDKFEQLGGTEVSYAEIAKKAWEVGRSRLATKLLDHESR
ASDQVPLLLTMKEDKLALLKAVDSGDTDLVYHVLLHLHKRLPLGSFFRLIEDGGERLSSA
SKLLEVYAREQNREMLRDFYYSDDRRVESAILSLEEASKMNNPASKISSVKAAQKFFSED
KDRTFEAKMMEESVRLLTTQQQLDIETDGKITFFGTSVNESIRLCLVNNMAKRADKMKSD
FKVPDKRFWHIKLKALTEVKAFGELETFSKSKRSPIGYEPFVRHLVEKGLPKEAVAYVAR
CDSPKRADLYVECGEWRLAGKECKDRGDKAKLEQLRRKCPNSMIERELDQILSTMK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacatccgacagcgacatggcaggctatgcaagacggaaacgcattctacaga
cggcagcagctctactccataccaggaaaactccctgattttggggactacatcgtcgca
ggatgtcaatatggtggacctctagcgcttatgagggacaacacaaagcttctggcttta
gggcgtctaactcctgcagctgcgaaggcacaaattcagatatactctccagcgggagag
agcctcttgtcattcagttgggaccagggcaagatcatcaagtttggttggactcgagac
gagacactgacagtcttgaatgaagagggcatctatcgactctacgacctgcaaggagac
taccagcagcactcccttggccccgaagcttccgaactaggaattattgacgctcgcata
catgacaatggcttcgtggccatgactagttctttggcgttgctggaagtgaagggttgg
gaagggggaagacctctaactttagccaacccagcactcactcaacctccgcacgcctgg
tgcatcataccgccagacttaaatgtatcccgtcatgttgaagtcctcttatcggtggaa
tccaccatatataccgtggacaatttggaaagcgtggaccagcgcctatctcgaggaccc
tttacccatgtttcaccatctcccaatggcaagcttcttgcgctcttaaccttttcggga
acgttatgggttgtatccagtgatttccagaggaatatagcggagttcgacgccagcagt
gttcctgaggcagaaggcaatgttctgcaggttgaatggtgcggaaatgatgccattgcc
gttgcgtggaagtttttggttcttttggtcggcccttcgggtgatacactccagtatgct
tattctgggactccttttgcagtcacagaaatggatggggttcgcatcatgagcccagat
atatgtgatctactacagaaagtgcctgcatctacctcatctatcttccgtcctggatct
acctctccttctgcgattttgtacgacgcgtgggagagcttctcttctcgttctcccaaa
gcagatgagagcattcgttcaatacgacctgatctggcgaaagctgtcgacgagtgtatt
gatgctgcgggccaagagtgggagcctcagttacaacggaaacttctgaatgctgctaag
tttggtcgtagtttcttggatttccacaaccccacggattttgtcaacatgggtcaaacc
ctaaaagtacttaatgcagtacgattttacgaggttggtatcccattaacatattcggaa
cataactacgcctctccctcgcatttgatctcacgtctaacatctcgaaatctgcatctc
ctcgctctccgaatctcgagtttcctttccctcaagccagatattgtcttaaagcactgg
gcttgtgcaaaaattctgcgggatgccgaattgactgcggatgatgaagtttgtaagctg
atcgtagataaatttgagcagctggggggaacggaggttagctatgctgaaattgcaaag
aaagcatgggaggtggggcggagtagattggctacaaagctccttgatcatgaatcgaga
gcttctgatcaggtaccactgctacttacaatgaaggaggataagttggctctgctgaag
gcagttgatagtggagatactgacttggtgtatcatgttctgctccatctccataagagg
cttcctcttggctctttcttccggctcatcgaagacggcggggagcgactttcttcagca
agcaaactccttgaggtttatgctcgagaacagaacagggaaatgttgcgagatttctac
tactctgacgaccgcagagtggagagcgcgattctttctctagaggaagcatctaagatg
aacaatcctgcgtcgaagattagctccgtgaaggcagctcagaaattcttttcagaggac
aaggaccgcactttcgaagcgaaaatgatggaagagagcgtccggttgcttaccacccaa
caacaactcgatatcgagactgatgggaagatcaccttttttgggacaagtgtcaatgaa
tcgatacgactttgcctggttaacaacatggcgaaacgggctgataagatgaagtctgat
ttcaaggtacccgataagcgcttttggcatatcaaactcaaagcacttacagaagtcaaa
gcttttggagagctcgaaactttttccaaatctaagcgcagtccaattggttatgagcct
tttgtccgccatctagttgaaaaaggtcttccgaaagaagccgtcgcctatgttgcgcgc
tgcgattcaccaaaacgggctgatctatatgtcgagtgtggagagtggcgccttgccggc
aaggagtgtaaagacagaggtgataaagctaagttagagcagctgagaagaaagtgtcct
aattcaatgatcgaaagagagttagatcaaatcctctcgactatgaagtag
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integrated database retrieval system
