Laccaria bicolor: LACBIDRAFT_228107
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Entry
LACBIDRAFT_228107 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
LACBIDRAFT_228107
04148 Efferocytosis
LACBIDRAFT_228107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_228107
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LACBIDRAFT_228107
Hops complex
LACBIDRAFT_228107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf-RING_2
WSD
zf-RING_16
zf-RING_11
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
6069878
NCBI-ProteinID:
XP_001873954
JGI:
228107
UniProt:
B0CR26
LinkDB
All DBs
AA seq
1002 aa
AA seq
DB search
MRFCTDVQHPTGNSGRQAAGLAPLPQLHFEGFEPSPHHSDDIRAEVDDITVRYQAYIYEY
YLSTAQETEEHVSDAPVFDLGRVQYAFPAPLISFVVSSDMLAMGFASNSIVLIELSHADQ
VIKVQIPRKPTEMTIHKLFMDPSGRHIIITSQQGENWYLFRTWKKPRQLKGFKMVIESVA
WNKSALLSSSHSTSTKEILIGGRNGVVYEAVLDAEEDFFKSQERYLQSVYSLPEKHPITG
IKFDYSPPSDPKHALVLVTTLTRIYQFFGVVDRKSEEGGRVFSALFAQYRETILELPGNL
NSSELQFFTPNSDQALSTPKRLAWITGPGIYHGSLNLEPSTEDHIDAAQLLPYPSFVASS
SEIPEAPLSLSLTEFHFILLYKNRIVGICNLDDKITYEETLPIKANEVIRGLASDPVRKT
YWVYTDQSLFELVVGNEDRDVWKIYLEKGEFDTALRYAKTAGQRDQIILAQAESFFTEGR
YYQAAQSYARCSASFEEVALKLLDVGERDSLRSYLISRLERSRKTDLTQRMMLATWLVEF
YLSKCNELDDIVASESVSHDVDNLKAERIILSELCFIKQSNLDKETVYELLQNHGRVDMY
LHYATAVGDFERVAEHWILEEQWIKAIETINRQSDLDLYYRFGPVLIRQAPKETVDAWLR
QPSLDPLRLIPSLLQLQHAHPDPLSPNQAIRYLNHVVFEQQSTLPTIHNLLIIFYASSLE
DDGPLLRFLSSAPTDANTGRPYYDLDYALRLCKSTGRTQPCVHIYSKMGLWENSVDLALE
KGDLELAKINADMPEDDQPLRKKLWLKIARYVVQDKKDIKSAMRFLENTDLLKIEDILPF
FPDFVVIDDFKEEIAHALEGYSSHIETLKSEMDEATRTAESIQQDIAALKQRFITIDAGE
QCSTCSNLLLTRQFYVFPCHHSFHADCLIGLIKEYLPAHALRRIITLQDQLVKNIEGGVK
AEKLRAELDDLLASTCPLCESVVSGLDKPFVKEGEVDTSWAL
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttctgcacagacgtacaacatcccactggaaactcaggcagacaagccgcgggc
ctggcacccttgccgcagttgcattttgagggttttgagccttcgccacatcactccgat
gacattcgtgcagaggtagacgacattacggtacgttatcaggcttatatatatgagtac
tatctgagcaccgcacaggagactgaagagcatgtgtctgacgcgccagttttcgatctt
ggacgagttcaatacgccttccccgcccctctaatatcttttgttgtcagttccgacatg
cttgccatggggtttgcctccaactccattgtgcttatagaactgtcacatgcggaccaa
gtcataaaggtccagatcccgagaaaacccacagagatgaccatacacaagctctttatg
gacccttcgggacgacatatcatcatcacatctcaacaaggggaaaattggtacttattc
cgaacttggaagaagccccgccaactgaaaggcttcaagatggtaattgaaagtgtggca
tggaacaaatctgctctgctctcttcttcccattcgacctcaaccaaagaaatccttata
ggaggtaggaacggcgttgtgtacgaggccgttcttgacgcagaggaagatttcttcaaa
tcacaagaacgctatctgcagtcggtatattccctcccagaaaagcatccgatcacaggc
attaagttcgactattctcctccgtcggaccccaagcacgccctggtacttgtgacgact
ctgactaggatataccaattcttcggagttgtcgatcgaaaatctgaagagggaggaaga
gttttctctgcccttttcgctcagtatcgcgaaacaatcctcgaacttcctggaaatctc
aattcttcagaattgcagtttttcacaccgaactctgatcaagcgctgtcaacaccgaaa
cgtttggcgtggataacaggacctggaatttatcatggaagcttgaatttggaacccagc
actgaagaccatatcgatgccgctcaattacttccctacccatcattcgtagcttcttca
agcgagataccagaggctcctttgtcgctatctttgactgagttccatttcattttgctc
tataagaatcggatagtgggaatctgtaatctggacgataaaataacttacgaggagacg
ttgcctattaaagccaacgaagtaatccgcggtctggcatccgatcccgttcgcaaaaca
tactgggtgtacaccgatcaatccttattcgagctggtggtcggtaacgaggatcgggat
gtctggaagatatatctcgagaaaggtgaatttgacactgcccttcggtacgcaaagaca
gctggccaacgcgaccagattatacttgcacaggcagaaagttttttcactgaaggtcgt
tactatcaagctgcacaatcgtacgcccgttgttctgcttcgtttgaggaggtcgcttta
aagttgctggatgttggggagcgtgattctttgaggtcatatttgatatcaaggttggaa
cgaagtcgcaaaacagacttaacacaaaggatgatgcttgcgacttggttggttgagttc
tacttaagcaagtgcaatgaattggatgacattgtggcatccgaatcggtttctcatgat
gtcgacaacctaaaagctgaacggatcattctttctgaactatgctttatcaaacagagc
aacctcgataaagaaactgtctacgaactccttcaaaatcacgggagagtcgatatgtat
cttcactatgccaccgcggtaggtgattttgaaagggttgcggagcattggattctcgaa
gagcaatggataaaggccatcgaaaccattaatcgccagtcagaccttgacctttactat
cgttttggtcctgttctcattcgccaagcgcccaaagagactgtagatgcctggcttcgt
caaccttcacttgatcctcttcgcctcattccttccctcctccaacttcaacatgctcat
cctgatccgttatctccgaatcaagcaattcgctaccttaatcacgtcgtatttgagcag
cagagcacgttgcccactatacataatctactaattatcttctacgcatcgtcattggag
gacgatggccctcttcttcggtttctatcctcagcaccgactgatgcaaacacgggaaga
ccatattacgatttggattacgcactacgtctgtgcaaatcgaccggtcgcacccaaccc
tgcgtgcatatatattccaagatgggtttatgggaaaacagtgtggaccttgcgttggaa
aaaggagatctggagttggcaaagatcaacgcagatatgcccgaagacgaccagcctttg
cgcaaaaagttatggctcaaaatcgctcgctatgtggtccaagataagaaggatatcaaa
tcggctatgcgattcctggaaaatacggatcttctcaaaattgaggatatattgcccttc
ttccctgactttgtggtgattgatgatttcaaagaggaaatcgcccatgcattggaaggc
tattcttcacacatcgaaacactgaaaagcgaaatggatgaagctacacggaccgcggaa
tccattcaacaggacatcgccgcgctcaagcagcgattcatcaccatcgatgctggcgaa
caatgctcaacatgttcaaatttgttgttgaccaggcagttctatgtatttccttgccac
cactcatttcatgctgattgtctgattggactgattaaagaatatttgccagcacatgcg
ttacgtagaatcatcacgctacaagatcagcttgttaaaaatatcgagggaggggtgaag
gcggaaaagttgagggcggagctagacgacttacttgcaagcacctgtccattgtgtgag
agtgttgtctctgggcttgataagccgtttgtaaaggagggagaggtggacacatcatgg
gcgttataa
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integrated database retrieval system