Laccaria bicolor: LACBIDRAFT_230870
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Entry
LACBIDRAFT_230870 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_230870
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LACBIDRAFT_230870
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
Helicases
LACBIDRAFT_230870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
WHD_HA2
DEAD
AAA_22
ResIII
ATPase
AAA_23
AAA_19
nSTAND3
Motif
Other DBs
NCBI-GeneID:
6071306
NCBI-ProteinID:
XP_001876215
JGI:
230870
UniProt:
B0CVA6
LinkDB
All DBs
AA seq
1099 aa
AA seq
DB search
MLGTGKTLTHQELQDRSEDKEVRKALDGRSGKRKRHEDKFAVHGLDTEDSQDDEILAAET
VTRPSHPQVIFDSAIPPPKNESEPSAVGSALKRKSDGSVVMPKISKTKQVSWVRKRSAPA
KEESDTSFDSSDSAYDSTDDAVDSSGSDEDFETGSEDEDKEDAGILLEESTPHLSAKKKL
GFKDWAVKQLSVAKGYNLPTQETDVIPPVETPPTKKRKIESSTDLPTMRGPLGEDLQIPK
TTLADQVLGSEQQAKAASYVKAVAVKRPPSVEEARLLLPIVAEEQPIMEAILLNPVVIIC
GETGSGKTTQVPQFLYESGFGTPGSENPGMIGITQPRRVAAVSMAARVAYELSLTSSRVS
HQIRYDATVSPSTSIKFMTDGVLLRELANDFILSRYSVIIIDEAHERSMNTDILIGVLSR
VVKLREEMWKERKDDVKPLRLIIMSATLRVSDFADNTTLFSSRPPVINVAARQHPVTIHF
SRRTSPNYVNEAVRKATKIHTRLPPGGILIFLTGQNEIIGACRKLEAKFGKKALDLKKKN
RSRPSQQEADVEPEDLDLGNSDQDGLAFDVDENMDQEDPEALDSEDEQNLDEELGLEEDS
DVPMHIVPLYSLLPSEKQMRVFEPPPPGCRLVVVSTNVAETSLTIPGIRYVVDCGRAKER
RYDIANGIQAFQISWVSKASAAQRAGRAGRTGPGHCYRLYSSALFEHHFEQFSTPEIQRM
PIEGVVLQMKSMHIDAVVNFPFPTSPDKAAMRKAEKTLTHLGALTFATPDIKNALSSVGQ
ITDLGRTMALFPVSPRFSRMLVSGQQHDCLPYVISIVSAMSVGDPFLYEEVIGQDGSDGE
NDVESSLMNLKSDSVRAKEARNLKRKAFFQSQHMHSSLGNHSSDVFKVLSVVGGYEYAGG
GHKFCSENFVRPKAMEEIHKLRAQINNIVQTNFPGVDTKFAPKLPPPNERQVKILKQLLT
AGFIDQVAVRKNRVEGADGVQVSTSKGVPYKAMGISEDAFIHPSSVLANSPPPDYIIFSE
VIRSSRIFLKGKHSQSSSTQCFTLCLGVTAVNPSWLSALGKPSLCSFSKPLKNNVGTLVM
IPQFGPDKWELPAVKAELR
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtactgggaagactttgacacaccaagagcttcaggataggtcagaagataag
gaggtgcggaaagcgttagatggacgcagcgggaagcggaaaaggcacgaggacaagttt
gcagtccatgggttagacaccgaagatagccaggacgatgaaatccttgcggccgaaacc
gtcacccgaccttcgcatccccaagttatctttgactcagcaattccccctccaaagaat
gaaagcgaaccatctgccgtaggaagcgcgctaaaacgaaagtcagatggaagcgtcgtg
atgcccaaaattagtaagacgaagcaggttagttgggttcggaagcgctccgcgcctgcc
aaagaggaatctgatacctcgtttgacagttcagattcagcgtacgactcgacggacgat
gcggtagattcatcaggtagtgatgaagacttcgagactgggtcggaagatgaggataaa
gaggacgcagggattttattggaagaatctacaccccatctgtccgcgaagaagaagctg
ggttttaaagattgggctgtcaaacaactcagtgttgcaaaaggctacaacctcccaaca
caagagacagacgtcataccgcctgttgaaacccctcccacaaagaaacgaaagattgaa
agttcgaccgatctccccaccatgcgtggtcctctgggagaagacctccaaatcccaaaa
accacattggcagatcaagtcctgggttcagaacagcaggccaaggcagcctcatacgtt
aaggctgttgctgtcaagcggcctccatccgtcgaagaagcaaggttgctgctcccgatt
gtagcggaggagcaaccgattatggaagctattttgttgaatcccgtcgtcattatatgc
ggtgaaacaggaagtgggaagaccacccaagttccccagtttttgtatgaatccggcttt
ggtactccaggaagtgagaaccctgggatgatcggtataactcaacctcgtcgtgttgct
gctgtgtcgatggcagcgcgtgtagcttatgagctatcattgacgtcctctcgagtatca
catcaaatacgatatgatgcaacagtttcaccctcaacctcaatcaagttcatgacggac
ggagtcttgcttcgagagctcgccaacgactttattttgtcacggtattctgtaataata
atcgatgaagcccatgagcgaagtatgaacacagacattctcatcggcgttcttagccgt
gtggtcaagctacgagaagagatgtggaaagaaagaaaggacgacgtaaagccattgcgg
ttgatcatcatgtctgctaccttgcgagtaagcgattttgccgataatacgacgcttttt
tcctctcgcccgcctgtcatcaatgttgctgcacgccaacatccagtcacgatccatttc
agtcgccgtacttctccaaactatgtcaacgaagcagtcaggaaagcaacaaaaattcat
acccgcttacccccagggggtatattgatctttttaactggccagaacgagattattggt
gcttgtcgaaaactggaggctaaatttggaaagaaggcgcttgacctaaaaaagaaaaac
agatcacggccgagtcaacaggaggctgatgttgagcccgaggatcttgacctgggaaat
tctgatcaggatggtcttgcattcgatgtggacgaaaatatggaccaggaagatccagaa
gcgctagacagcgaagatgaacagaacctagacgaagaactcggtttggaggaggattcc
gatgtgccgatgcatattgtccccttgtactccctcctaccaagcgagaaacaaatgcgt
gtcttcgagccacccccgcctggttgccgtcttgttgtggtctctactaacgttgccgaa
acttcgctcactatcccgggtattcgctacgttgttgactgcggccgggccaaggaacga
cgctacgatatagcgaatgggatccaggccttccaaatctcatgggtatcgaaagcatcg
gcggcccaaagggctggccgagcgggccgtacaggtcctggtcattgttaccggctttac
tcatctgcccttttcgagcaccacttcgagcagttctcgactccagaaatacagcggatg
ccgatcgagggtgttgtgcttcaaatgaagagcatgcatatcgatgcagttgtcaatttt
ccgttccccacgtcaccggataaagccgccatgcggaaagcagagaaaacgttaacacac
ctcggcgctttgacttttgcgacaccagacattaaaaatgctctgtcaagtgtcggtcaa
atcactgacctgggaagaaccatggcgttattcccggtttcaccgcgattctctaggatg
ctggtaagcggacaacaacacgactgcttgccatatgttatttccatagtctccgccatg
tctgtcggcgaccctttcttgtatgaagaggttattggacaagatggcagcgatggggag
aatgatgtcgaatcaagcctcatgaatttgaaaagtgactccgtcagggccaaagaggcg
cgaaacttgaagcgaaaagcatttttccagtcgcaacatatgcactcttcattaggaaat
cattccagtgatgttttcaaagtactctctgttgttggtgggtatgaatatgccggtggc
ggacacaaattttgctcagagaattttgttcgacccaaagcgatggaggaaattcacaag
ctgagagctcaaatcaacaacatagtgcaaaccaacttccctggtgttgacactaaattc
gctccaaaacttccacctcccaatgagcgtcaagtgaaaattctgaagcaactcctaact
gcgggcttcattgatcaggttgccgttcggaaaaatcgcgttgaaggggcggatggagtt
caagtatcaacatcaaaaggagttccctacaaagccatggggatctcggaagatgctttt
atccacccttcatcagtgcttgccaacagtcctcccccagattacataattttcagtgag
gtcattagatcctctcgaatctttttgaaaggcaagcactctcagtcctcctcaactcaa
tgctttacactttgtctaggagtaacggctgttaatccatcctggctctcagcattaggc
aagccttcactatgctccttttccaagcccctcaaaaacaacgttggaacccttgtgatg
atccctcaatttgggccagacaaatgggaacttcccgctgtgaaagcggaattacggtaa
DBGET
integrated database retrieval system
