Laccaria bicolor: LACBIDRAFT_232800
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Entry
LACBIDRAFT_232800 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
lbc
Laccaria bicolor
Pathway
lbc03030
DNA replication
lbc03410
Base excision repair
lbc03420
Nucleotide excision repair
lbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACBIDRAFT_232800
03410 Base excision repair
LACBIDRAFT_232800
03420 Nucleotide excision repair
LACBIDRAFT_232800
03430 Mismatch repair
LACBIDRAFT_232800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbc03032
]
LACBIDRAFT_232800
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_232800
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_232800
DNA replication proteins [BR:
lbc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LACBIDRAFT_232800
DNA Replication Termination Factors
ELG1-RFC complex
LACBIDRAFT_232800
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LACBIDRAFT_232800
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LACBIDRAFT_232800
Check point factors
HRAD17(Rad24)-RFC complex
LACBIDRAFT_232800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_2
AAA_16
RuvB_N
AAA_5
AAA_14
AAA_24
SLFN-g3_helicase
AAA_7
AAA_assoc_2
AAA_30
AAA_28
Mg_chelatase
AAA_19
ResIII
bpMoxR
Parvo_NS1
DUF815
nSTAND3
RNA_helicase
AAA_25
Motif
Other DBs
NCBI-GeneID:
6074048
NCBI-ProteinID:
XP_001878229
JGI:
232800
UniProt:
B0D3I9
LinkDB
All DBs
AA seq
359 aa
AA seq
DB search
MSFFTPKTGSSAESVPKHTVDPRLQPWVEKYRPKTIDEVSAQEHTVAVLRKTLTSTNLPH
MLFYGPPGTGKTSTILALARQLFGPDNFRNRVLELNASDERGISIVRDKIKNFARQTPRA
QAVASDGKSYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEP
LASRCSKFRFTPLDSKSSFSRLSYIATAEHIDTNPAVINALISTSSGDLRRAITYLQSAS
RLSSSTIPPTPILPSDIQEIAGVVPDAVINKFSGILGVEKKTSFESINKEVKSLMREGYS
ATQILSQLHDVVILHPTLTGRQKSLCALVFAEADKALCDGADEELWILEAGLRIHKAVS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcttcactccaaaaactggatcgtctgcagagtccgtcccaaagcacaccgta
gatccacgattacaaccatgggttgagaaataccgtccgaagaccattgatgaagtttct
gctcaagaacacactgttgccgttcttcgcaagactctaacatcgaccaacctgcctcac
atgttgttctatggtcctccgggtacaggcaaaacatcaactatccttgctttggctcga
caactttttggcccagacaattttagaaacagggttcttgagttaaacgcgtcggatgaa
cgtggaatcagcatcgttagagacaagatcaagaacttcgcccgccagacaccgcgagcc
caagcggtggcttctgatggaaaatcatacccatgtcctccctacaaaattatcatcctt
gatgaagccgattccatgacacaagatgctcagggagcgctccgccgaataatggaaaca
tatgctcgaattacaagattctgtcttgtgtgcaactatgtcactcgtatcattgaacct
ctagcatcccgttgttccaagttccgatttacgccactggactcgaaatcctctttctct
cggctctcgtatattgcaacagctgagcacattgacacaaatccggccgtgatcaacgcc
cttattagcacttcatctggtgatcttcgacgtgccataacatatctgcaatcagcgtca
cgactttcgtcgtcaactatccccccaactcccatattaccatctgacatccaagaaatt
gccggtgtagttcccgacgctgtcatcaacaaattttcaggtatccttggggttgagaag
aaaaccagttttgagtctatcaacaaggaggtcaaatctttgatgcgagaaggatattcc
gctacgcaaattctgtcgcagctacatgatgtcgtcattctccatccaactttaactggc
cgacagaaatcgttgtgcgcgttggtgttcgctgaagctgacaaagccctttgcgacggt
gctgacgaagagttgtggatattggaggcaggacttcgaatacacaaggctgtatcgtaa
DBGET
integrated database retrieval system