KEGG   Laccaria bicolor: LACBIDRAFT_232800
Entry
LACBIDRAFT_232800 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
lbc  Laccaria bicolor
Pathway
lbc03030  DNA replication
lbc03410  Base excision repair
lbc03420  Nucleotide excision repair
lbc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LACBIDRAFT_232800
   03410 Base excision repair
    LACBIDRAFT_232800
   03420 Nucleotide excision repair
    LACBIDRAFT_232800
   03430 Mismatch repair
    LACBIDRAFT_232800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbc03032]
    LACBIDRAFT_232800
   03036 Chromosome and associated proteins [BR:lbc03036]
    LACBIDRAFT_232800
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_232800
DNA replication proteins [BR:lbc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    LACBIDRAFT_232800
  DNA Replication Termination Factors
   ELG1-RFC complex
    LACBIDRAFT_232800
Chromosome and associated proteins [BR:lbc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    LACBIDRAFT_232800
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     LACBIDRAFT_232800
  Check point factors
   HRAD17(Rad24)-RFC complex
    LACBIDRAFT_232800
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_22 AAA_11 AAA_2 AAA_16 RuvB_N AAA_5 AAA_14 AAA_24 SLFN-g3_helicase AAA_7 AAA_assoc_2 AAA_30 AAA_28 Mg_chelatase AAA_19 ResIII bpMoxR Parvo_NS1 DUF815 nSTAND3 RNA_helicase AAA_25
Other DBs
NCBI-GeneID: 6074048
NCBI-ProteinID: XP_001878229
JGI: 232800
UniProt: B0D3I9
LinkDB
AA seq 359 aa
MSFFTPKTGSSAESVPKHTVDPRLQPWVEKYRPKTIDEVSAQEHTVAVLRKTLTSTNLPH
MLFYGPPGTGKTSTILALARQLFGPDNFRNRVLELNASDERGISIVRDKIKNFARQTPRA
QAVASDGKSYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEP
LASRCSKFRFTPLDSKSSFSRLSYIATAEHIDTNPAVINALISTSSGDLRRAITYLQSAS
RLSSSTIPPTPILPSDIQEIAGVVPDAVINKFSGILGVEKKTSFESINKEVKSLMREGYS
ATQILSQLHDVVILHPTLTGRQKSLCALVFAEADKALCDGADEELWILEAGLRIHKAVS
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcattcttcactccaaaaactggatcgtctgcagagtccgtcccaaagcacaccgta
gatccacgattacaaccatgggttgagaaataccgtccgaagaccattgatgaagtttct
gctcaagaacacactgttgccgttcttcgcaagactctaacatcgaccaacctgcctcac
atgttgttctatggtcctccgggtacaggcaaaacatcaactatccttgctttggctcga
caactttttggcccagacaattttagaaacagggttcttgagttaaacgcgtcggatgaa
cgtggaatcagcatcgttagagacaagatcaagaacttcgcccgccagacaccgcgagcc
caagcggtggcttctgatggaaaatcatacccatgtcctccctacaaaattatcatcctt
gatgaagccgattccatgacacaagatgctcagggagcgctccgccgaataatggaaaca
tatgctcgaattacaagattctgtcttgtgtgcaactatgtcactcgtatcattgaacct
ctagcatcccgttgttccaagttccgatttacgccactggactcgaaatcctctttctct
cggctctcgtatattgcaacagctgagcacattgacacaaatccggccgtgatcaacgcc
cttattagcacttcatctggtgatcttcgacgtgccataacatatctgcaatcagcgtca
cgactttcgtcgtcaactatccccccaactcccatattaccatctgacatccaagaaatt
gccggtgtagttcccgacgctgtcatcaacaaattttcaggtatccttggggttgagaag
aaaaccagttttgagtctatcaacaaggaggtcaaatctttgatgcgagaaggatattcc
gctacgcaaattctgtcgcagctacatgatgtcgtcattctccatccaactttaactggc
cgacagaaatcgttgtgcgcgttggtgttcgctgaagctgacaaagccctttgcgacggt
gctgacgaagagttgtggatattggaggcaggacttcgaatacacaaggctgtatcgtaa

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