Laccaria bicolor: LACBIDRAFT_235177
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Entry
LACBIDRAFT_235177 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
LACBIDRAFT_235177
04148 Efferocytosis
LACBIDRAFT_235177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_235177
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LACBIDRAFT_235177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
Clathrin
TPR_Vps41
TPR_4
Motif
Other DBs
NCBI-GeneID:
6076620
NCBI-ProteinID:
XP_001880834
JGI:
235177
UniProt:
B0D9N1
LinkDB
All DBs
AA seq
555 aa
AA seq
DB search
IDTFIELDFNPAKVVALYPDAVAGRLSVPQDGWIPLYGGPAPIDPDDFQDSIKVDDIEKP
GHERAATDLLDTISSNTTTLSHLLTRVDDLHRSVETLVRYLADRRPKLKAALEVVNITPQ
TQAEKYPPLSTTTVEDLFALPNAPLSALTPEQLLRFAQIVDTALYKSYLIIRPTLLSSLC
RIANWCEVSEVEEDLRARQKYAELRDLYYGKGMHAKALGLLRELSEKETDMEDKLEPSIT
YLQKLGPEHIKQIFESSRWVFSMDKTLAFKIFTSEDVELPRQPVTDYLEKIDPKLSAQYL
EYIVADKQEEDPAFHDRLAELYFSMTITAGKRGDEKTRKEAYAKLLSFVDTNDRFGVDRL
YGLLSSTDLYEARAILLGRLGRHDQALELYVYRLHDYLKAEQYCKRVYQPGTESSSVFLT
LCRIYLRPTVETSTDLLQPALDLISRHNPRLDAVETLQLLPPLVTTQDVKAFLIESLRAP
IFDTKVVSQISKARKDQVSRKLMVLQSKRVKVTDSRICPQCHKRIGNSVIAVHAPRGEVT
HYQCRELFSRHLKDH
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atcgacacattcatcgagttagatttcaacccagccaaagttgttgctttataccctgat
gctgttgcaggccgactgtccgtccctcaagacggttggatcccattgtatggaggacct
gctcccatcgacccggatgattttcaagactcaattaaagtggacgacattgagaagcca
ggacatgagagagcagctactgatttgctggatacgataagcagtaataccacaactctt
tctcatcttttgacacgggtagatgatctccaccgttcagtcgagacacttgtacgctac
ctagccgatcgtcgaccgaagctcaaggctgctttggaagtcgtcaacatcacacctcag
acccaagcggagaaatacccaccgctctcaactaccaccgtcgaagacttgttcgccctc
cccaacgcgcctttatccgctctcactcctgaacagcttctccggttcgcgcagatcgtg
gacacggcgctctataaatcgtatttgatcattcgaccgactttgctgagctcgttgtgc
cgcattgcgaattggtgtgaggtttctgaggttgaggaggatttgagggcgcgtcagaaa
tacgccgaactccgggacctttattatgggaaaggcatgcatgcgaaggcgttgggtctc
ttgcgagaattgagtgaaaaggagacagacatggaagacaagctggagccttcaatcacg
tacctgcaaaagctgggccctgaacatattaagcagatttttgagtcatcaagatgggtt
ttcagcatggataagactctcgctttcaaaatatttacatcggaagacgtggaacttcca
cgacaacccgttacagattaccttgagaagatcgacccgaaattgtcagcccaatatctt
gagtatatcgttgcagacaagcaagaagaggaccctgcgttccatgatcggttagcggag
ctttacttcagcatgacgattactgcggggaagagaggggacgagaaaacacgaaaggag
gcgtacgcaaagctactcagctttgtggatacaaacgatcgattcggtgttgataggctg
tatggtttgctctcgtctacagatctctatgaagcaagagccatccttcttgggcgattg
gggcggcatgaccaagctctcgagctgtatgtttaccgtttacacgattacttgaaagcg
gaacagtattgtaaacgtgtttatcaacctggcacagaatcaagcagtgtattccttacg
ttgtgccggatatatttgcgaccaacggttgaaacgtcaacagacttgttgcagcccgct
ctcgacctcatcagtcggcacaatccccgactcgacgccgtagagacgttacaattgtta
ccccctctggttacgacccaggacgttaaagcattcttgatagaatcgcttcgtgcacca
atatttgataccaaggttgttagccagatcagcaaagcgaggaaagatcaagtttcgaga
aagctgatggtgttgcagagcaagagggtcaaggtgactgatagtcggatctgcccacaa
tgtcacaagcgaatagggaatagtgttatcgcggttcatgcccctcgcggcgaagttact
cattatcaatgtcgagagttgttttcgcggcatttgaaggatcattga
DBGET
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