Laccaria bicolor: LACBIDRAFT_245367
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Entry
LACBIDRAFT_245367 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lbc
Laccaria bicolor
Pathway
lbc04120
Ubiquitin mediated proteolysis
lbc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LACBIDRAFT_245367
04120 Ubiquitin mediated proteolysis
LACBIDRAFT_245367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbc04121
]
LACBIDRAFT_245367
Enzymes [BR:
lbc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LACBIDRAFT_245367
Ubiquitin system [BR:
lbc04121
]
Ubiquitin ligases (E3)
U-box type E3
LACBIDRAFT_245367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
6071614
NCBI-ProteinID:
XP_001876289
JGI:
245367
UniProt:
B0CVQ7
LinkDB
All DBs
AA seq
1007 aa
AA seq
DB search
LETWEHDVITSVLKVTLRVRVAEKSGFETVWLKQLADDMASEGTAPSRLSVDILDQLLIS
RLEIDPQTMTDDLDFLPVLASLPAQQTIFEFLVGCWKRLNATRSAFLKKNYPPVDTQKGL
DRLEKIRELLISYAGFSLQEPDMFPQPSGRPLGPPELVQPLLSLSALSAPLLSSPTSNPN
SLSPSDVEQFLQDVARRFEPDNEIDGILGPVVRELLFHESLFRPEGLGGGDAIWRGVVSG
LEVLVSIKTIAVMVTRMPEWNPIATAPVFERVSLLGPLCRLGVFSAEWPGIGQAYFSDPE
KRTRDDIESSFASLRGTLKSLQSSLFQVFNTLVRASAESREAVLQYFARVIALNVKRAGM
QVDPNTVSSDSFMVNIQSILYRFAEPFMDANYTKMDRIDPLFYAQSSRIDLKEETRIKAT
SEEANQWSEENRKPDAPPPNFISNIFFISIAMSHYGYLKTIQTYNGLAKHVEDIQRHLEM
LNSDGSWMGTPMQARTEAAIKHVKNEQAKIKMQQLSFEAGLLDPELVFRSIGFTNFLSTW
LIRQADPKKAHPNPTVELPLPKEVPMSFRVLPEYIVEDIVDYLYFAVQSSPDKFELSGKI
ELLTFVLTFLTSTWYIKNPFLKSKINDVLFMSIWGYGRERNGILGNLLNTHPMALKYLMP
ALMHFYIEVEQTGASSQFYDKFSARNISYILKVVWNNPTHRQALNLEALNVDKFVRFVNL
MINDVTYLMDESLSELTQIHNIQVEMDDKETWDAKPVEYRRERESTLRSLERHASGYTTL
GRSTVELLKVFTAETKGPFMMPEIVDRLAAMLDYNLQALAGPRCQELKVREPEKLKFDPK
ALLTDIIQVFLNLSDQKEFIQAVAGDGRSYTKELFDRAEGIAIRKGLKTETELESLRIFV
AKVEEAKATIEAEEDLGDVPDEFLDPLMFTVMRDPVLLPSSKTILDRATIKSHLLSDSKD
PFNRAPLSIEDVVSVPELKQRIDTFLLERQLKGKIPPETTVHMDTTT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
cttgaaacttgggagcatgatgttattactagtgtcctgaaggtgacactcagggtgcgt
gttgctgagaagagtggctttgaaactgtctggttgaagcaactcgcggatgacatggct
tcagagggaactgcgccttcgcggctttccgtagatatcttggaccagcttttgatttct
cgattagagattgatccccaaactatgacagacgatttggactttcttcccgtactggcc
tccctccccgctcagcaaactatcttcgaatttcttgtcgggtgttggaagcgtttgaac
gcgacgaggtccgcgttcctgaagaagaattaccccccagtggacacgcagaagggactt
gatcgcctggagaaaatccgtgaacttcttatcagctacgcggggttctccctgcaggag
ccagatatgtttccccaaccatcaggacgacccctcggtccaccggagcttgttcaacca
cttctttccctctcagctctctcagcccccctcctttccagccctacgtctaatccgaat
tctctatccccttccgatgttgagcaattcctgcaggacgtcgcgcgccgtttcgaaccc
gataatgagatcgacggtattctcggtcctgtcgttcgcgagttgcttttccacgaatca
ctcttcaggccggaaggtctcggtggaggcgacgcgatctggcgaggagttgtaagcgga
ttagaggtcttagtgtcaatcaaaaccattgctgttatggtcacaagaatgcctgagtgg
aatcccattgcaacggctcctgtttttgaacgtgtctcgttgctcgggccattgtgcagg
ctgggcgtcttttctgctgaatggccaggaattggacaggcatacttttctgatcccgag
aaacgaaccagagacgatatcgaatcatcctttgcaagtttgaggggaacactcaaaagc
ttgcagtcttccttattccaagtctttaacacgttggtgagagcgtcggcagagtcacgg
gaagccgttctccagtactttgcacgcgtgattgcactgaatgtgaagcgtgcaggaatg
caggtcgatccaaataccgtctcgtctgatagcttcatggtgaatatacaaagcatcctg
tatcgttttgcagagccattcatggatgcaaactataccaaaatggaccgcatcgacccc
ctgttctatgcacagtcatcgcgtattgatttgaaggaagagacaagaattaaagcgaca
agcgaagaagcaaaccaatggtctgaagagaacagaaaacccgatgccccacctccgaac
ttcatctccaacatcttctttatttcaatcgccatgagtcactatggctatctaaaaacc
attcaaacatacaatgggctggcaaagcacgttgaggacattcaaaggcatctcgagatg
ttgaacagcgatggatcgtggatgggtactcccatgcaagctcgcacggaggcagcgatc
aaacacgtaaagaacgagcaggcgaaaattaagatgcagcaactctcatttgaggccggc
ttgcttgatcctgaactcgtttttcgatcgatcggattcacgaatttcttgtcaacttgg
ttaataaggcaagcagatccgaagaaggcacatcctaatccaactgtcgagctacctctt
cccaaggaagtacctatgtctttcagagtgctcccagaatacatcgtggaggacatcgtc
gattatctttacttcgctgtgcagtcatccccagacaaatttgaactgtcagggaagatt
gagctattgacctttgtcctgacattcctcacttcgacttggtacatcaagaatccgttc
ctcaaatccaaaatcaacgatgttcttttcatgagcatctggggttatggacgcgaaagg
aacggcatccttggaaatctcctgaacactcatccgatggcactcaagtatctcatgccc
gcgctgatgcatttctacattgaggtggaacaaactggcgcaagctctcagttttatgac
aaattcagtgcacggaacatctcttacatcctgaaagtggtatggaacaaccctacccac
agacaggcactaaacctcgaggctttaaatgtcgacaagttcgttcgctttgtgaatctt
atgatcaacgacgtgacgtacctcatggacgaatctttgagcgagcttacccaaatccac
aacattcaagttgaaatggatgacaaggaaacttgggatgccaagcccgttgagtacagg
cgggaacgtgaaagcactttgcggtcactggaacgccatgcttcaggatatacaacactt
ggaagatctaccgtcgagctgctcaaagtgtttacggcggaaactaagggaccgtttatg
atgccggaaatcgtcgatcgtcttgcagcgatgttggactacaacctacaagccctcgct
ggacctcggtgtcaagaactgaaagtccgtgaaccggaaaagcttaaattcgaccctaaa
gccttgttgacggatatcatacaagtattcttgaacttgagtgaccagaaagaattcatc
caggctgtagctggtgatggtcgaagttacaccaaggagttgtttgatcgagctgagggt
atcgctatcagaaaggggctgaaaacggagactgaacttgaaagcttgcgaatctttgtt
gccaaggtcgaggaggcgaaggcaacaatagaggcagaggaagacctaggggatgtccca
gatgagttcctagacccacttatgttcactgtcatgagggatcctgtactgctaccctcg
tccaagaccatccttgaccgtgctacgatcaagtcacatttattatcagattccaaagat
cctttcaacagagcaccactgtcaatcgaggatgttgtttcagtgccggaactcaaacaa
cgcatcgacacgttcttgttggaaaggcaattaaagggtaagattcctcccgagacgacg
gtgcacatggacacgactacgtag
DBGET
integrated database retrieval system