Laccaria bicolor: LACBIDRAFT_246569
Help
Entry
LACBIDRAFT_246569 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LACBIDRAFT_246569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_246569
Enzymes [BR:
lbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LACBIDRAFT_246569
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LACBIDRAFT_246569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
6072470
NCBI-ProteinID:
XP_001877002
JGI:
246569
UniProt:
B0CXK3
LinkDB
All DBs
AA seq
1179 aa
AA seq
DB search
MPDGSQKTRRIPTFNTLVRENAFRNPPKEGSTYSILNEFVAPHLESFNALFDDSGLLSLA
LKDIGERVAFDGDGKVGSESGPDGWGNRIRIWIEQVTVARPMVPEKDRTAKERKVFPTEA
RERLTSYRGRMTVKLCWTDISGQRHEMPKDCGLLPIMVRSVRCNLRSMSSAELVKHHEEP
EEFGGYFVINGNERLIRYLILPRRNHVISLLRPSFSNRGPSYTQYAVQMRCVRPDQTSVT
NTLHYLSNGSAMLRFSWRKQEYVIPIMLVLKALVGASDKEIFEGVIMQDYENTFLTDRVE
LLLRSFKMFTMQTGEQCLEYLGDKFRVVLNLPEDWTNAAQGAWLLRKMILVHLETPREKF
RMLLFMLRKLYSLVSGSCCADNPDSPQHQEVLLPGSLYGMIIKERLEEILNGIRMGISMD
VRNGVAVDFNDKRYFQKVVSKVNFDIGSKLSNFLATGNLVSPTGLDLQQASGFTIVAEKL
NWQRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRSCRI
TTTPLAVAHIPALLAAHGMTQVFTPTIDGRKNLSVQLDGRVIGWARPSVAAQLATNLRIW
KTEGKHEVPLDLEIGLVPVSNGGQYPGLFLFSTTARMMRPVKYLGNGRDDQVGPFEQVYM
NIACIPEEIEEAVSTHVEHEPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQSMGTPATA
LQHRTDNKLYRLQTGQSPVVRPALHNTYAMDSFPNGTNAIVAVISYTGYDMEDAMILNKS
AHERGFGYGTVYKSQIIDLKEMRGASKLNSVPTLHFGLGNDIRTTGDKLHACLEFLDLDG
LPFIGARLSSGDPIAAYVDDTTGRTKFVRYKGDELGYIDEVRLLGFDAGDTELQKIHITL
RITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFSESGMQPDVIINPHAFPSRMTIGMLVE
SMAGKAGAMHGLAQDATPFKFSEEDTAINYFGEQLLAAGYNYYGNEPMYSGITGQEFAAD
IYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGRKRAGGIRFGEMERDALIAHGTS
FLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDTLKPSGPGGEYCRVCRAASEEEDERERQ
ALATASKGGDLDVVAVPYVFRYLCAELASMGIAVSLEVR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacggatcgcagaaaactcgccgaataccaacattcaacactcttgttagggaa
aacgcgtttagaaaccctccaaaagaaggttcaacttatagcattctaaatgaattcgtt
gcgcctcaccttgaatcattcaatgcgttatttgacgactctgggcttctttcccttgcg
ttaaaggacatcggagagcgggttgcatttgacggagatggaaaagtgggctcagagagt
ggaccggacggttggggaaacagaataagaatatggattgagcaagttaccgttgcgaga
ccaatggtccccgagaaagacaggaccgcgaaggaaaggaaagtctttccgactgaggct
cgggaacgccttacctcgtatcgtgggcgcatgactgtcaaattatgttggaccgacatt
tcaggtcaaagacatgaaatgcccaaggactgtggtcttttacccatcatggttcggtct
gtccgttgtaatttgcgatccatgtcgtctgccgaattagtgaagcatcatgaagagcct
gaagaatttggcggctattttgtgattaacggcaacgagcgcttaattcggtacctcatt
ctacctcgacgaaaccatgttatatcccttctgcgtccatcgttctcaaaccgaggacct
tcctatacacaatacgctgtacaaatgcgttgcgtccgtccagaccaaacaagcgttacc
aacacactacattatctctcgaacgggagcgccatgttgcgatttagctggagaaaacaa
gaatacgtgattcctatcatgcttgttctaaaagctctggttggcgcctccgacaaggaa
atattcgagggcgtgataatgcaggactatgagaatacctttttgaccgacagagtcgaa
ttgcttttacgcagttttaaaatgttcactatgcagaccggagagcaatgtctggaatac
ttgggagacaagttccgagttgttctcaaccttcctgaagattggacgaatgctgctcaa
ggtgcatggcttctcagaaaaatgatcctcgttcacctggagactccacgcgaaaaattt
aggatgcttctttttatgcttcgaaaattgtattccctggtctcagggtcatgctgcgca
gataatcccgattcccctcaacatcaagaagtcctgcttcctggtagtctatatggcatg
atcatcaaggaacgcctggaagaaattttgaacggaatcagaatgggcatctccatggat
gtaagaaacggagttgccgtggacttcaacgacaagcgctattttcaaaaagttgtctca
aaagtcaacttcgacatcggctcaaaactctccaattttctcgctaccggcaacctcgtc
tctccaaccgggcttgatcttcaacaagcttcaggattcacaatcgtggctgaaaagctg
aattggcaacgttacatcagtcatttcagatgcatccatcgtggtgcattcttcgccgaa
ctcaaaactactaccgttcgaaaactgttaccagaagcctggggtttcttatgcccggtc
catacacctgatggatcaccttgtggccttctcaaccatctttcacgtagttgccgcatt
acgaccactccacttgctgttgcacacattcctgcccttcttgcagcgcatggaatgact
caagtgtttacccctacaatcgacgggcgcaagaatttaagtgtccagcttgacgggcga
gtaattggatgggctagacccagtgtcgctgctcaactcgccacgaaccttcggatatgg
aagacggaagggaaacatgaagtcccgttagatctcgagattggacttgtgcctgtctcg
aacggtggccaatacccgggactcttcttattctcaaccacagcaagaatgatgcgacca
gtcaaatatctcggcaatggacgggatgatcaggttgggcccttcgagcaagtttatatg
aacattgcgtgcatccctgaggagatcgaggaagctgtgtcaacacacgtcgaacacgaa
ccaacgaatttcttgtctattttagccaatctgacaccattctctgacttcaaccagagc
cctcgaaatatttatcaatgtcagatgggtaaacaaagtatgggaacaccagccaccgcc
cttcagcatcgaacagacaacaagctctaccgtctgcaaacaggccaatcccctgtcgtt
cggccagccttgcacaacacatatgccatggactctttcccaaacggtacaaacgcaatt
gttgctgtaatatcatatacaggctacgacatggaggatgccatgattctcaacaagtcg
gcgcacgaaaggggctttggatatggcacagtttataaatcccaaatcatcgatttaaag
gagatgcgtggggcatctaagttaaattcagttccaacactgcattttggccttgggaat
gacatccgaacgacaggtgacaaactgcatgcctgcctcgagttcctcgacttggatggc
ctgccttttattggggctcgactgagctctggcgacccaattgctgcttatgttgacgat
acgaccggacgaacgaaatttgtcagatacaagggtgacgagctggggtatatagatgaa
gttcgtctactaggtttcgatgctggcgacaccgaactacaaaagattcacattacactg
cgtatcacacgatcacctgtcatcggtgacaagttctcatctcgacatggacagaagggt
gtttgctcacagaagtggcctgcagtcgatatgccgttcagcgagagtggtatgcaacct
gatgttattatcaaccctcatgccttccctagtcgtatgacgattggcatgttggtcgag
agtatggcaggcaaagctggtgctatgcatggccttgcgcaagacgctacaccgtttaag
ttttcggaagaggatacggctatcaactatttcggggaacaattattagctgctggctac
aattactacggtaacgaaccgatgtactcgggaataacaggtcaagaattcgccgccgac
atatacatcggagtcgtgtactatcagcgattgcgccacatggttcttgacaagttccag
gtccgtaccacaggtcctgtcgatcccgtaacccgtcaacccgttaaaggtcgtaaacgt
gcgggcggtatccgcttcggtgagatggaacgcgatgccctgattgcgcatggaacgtct
ttcttgcttcaagacagattgatgaattgctcagactactcgactgcgtgggtatgtcga
acatgtgggagtttgatctccttagggtatgaggacactctgaaaccgtcagggcctgga
ggtgaatattgtcgagtatgtagagctgcgtcagaagaagaggacgaacgggaacggcaa
gcgctcgccaccgcgtcaaaaggaggtgacctcgatgttgttgcagttccctatgtcttc
agatacctatgtgcagaattggcatctatgggtattgctgtatctttagaagtccgttag
DBGET
integrated database retrieval system