Laccaria bicolor: LACBIDRAFT_248227
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Entry
LACBIDRAFT_248227 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_248227
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACBIDRAFT_248227
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
Helicases
LACBIDRAFT_248227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
6074324
NCBI-ProteinID:
XP_001879002
JGI:
248227
UniProt:
B0D4F4
LinkDB
All DBs
AA seq
654 aa
AA seq
DB search
KAFSDLPISDATKRGLKKAFFMDMTDIQTKSLPISLKGKDVLGAAQTGSGKTLAFLVPVL
EILYRRKWGAADGLGALIISPTRELAVQIFDVLRSIGGYHSFSAGLVIGGKNLKDERDRL
SRMNILVATPGRLLQHMDQTVGFDADNLQVLVLDEADRILDMGFQKTLAALLSHLPKSRQ
TLLFSATQTQSVSDLARLSLKDPVYVGINVASSSTSTMPQNLEQHYVICELDKKLDVLWS
FIKTHLQSKIIVFMSSCKQVRFVFETFCKMHPGVPLLHLHGKQKQSARLTMYTKFSSISH
AVLFATDIAARGLDFPSVDWVLQMDAPEDADTYIHRVGRTARYESKGKALLFLMPSEEEG
MKVALQKRAIDVKQIKIRASKTQTIENQLQNLAFQDPEIKYLGQRAFVSYLRSIYIHKDK
SIFKLEELPVDRFAESLGLPGTPKIKFLNKEIAKKKKNASRTVEAAQAESSEEDEDDEGV
QTAISKPTAVRTKYDRMFERKNQNVLSEHYSKLIDHEPMSDDGDDFITLKRADHGLEDKT
PTYDASELSKRKLKLGRAKRTIAKGGLSTKLVFDDEGKPHELYEMADPDAWFEGTGGLAG
AKEEGKKFAEGERGKMKVADVVDKEEAREKKREKKRKRKDKEKAVCPFFFSLDK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
aaggcattttccgatctccctatatcagacgcgacgaagagaggtctgaagaaagcattc
ttcatggacatgacggacatccagacgaagagtctacccatatcactcaaagggaaagac
gtccttggtgcagcgcaaacaggaagtgggaagacattagcgtttctcgttcctgtcttg
gagattctctaccgtcggaaatggggtgctgcagacggactaggagcgttgattatctct
ccgacgcgagaacttgctgtacaaatattcgatgtcttgcgttcgattggagggtatcat
tccttttctgctgggttagtcatcggcggcaagaacctcaaggatgaacgggaccgacta
tctcgaatgaacatccttgttgccacgccaggaaggcttctccagcatatggaccagaca
gtcggtttcgatgcggataatttacaagttttagttctcgatgaagccgacagaattctg
gatatgggcttccaaaaaaccctcgccgccctcctctctcacttacccaaatctcgccaa
actcttcttttctccgccacgcaaacccagtccgtcagtgatcttgcacgccttagcctc
aaagatccagtctacgtcgggatcaacgtagcaagctcatcaacgtccaccatgccgcaa
aaccttgaacaacactacgttatttgcgagttggacaaaaaacttgacgtcctatggagc
ttcatcaaaacgcacctacaatctaaaatcatagtctttatgtccagctgtaagcaagtc
cgcttcgtttttgagacattttgcaagatgcatcccggtgttcccctcctccaccttcac
gggaagcaaaaacaatccgcaagactcacaatgtacaccaaattctcctcaatatctcat
gcagtgctttttgccactgatatcgcggcgcgaggtctggacttcccttctgtcgactgg
gtgctgcaaatggatgccccagaggatgccgatacctatatccaccgtgtgggaaggacg
gcacggtatgaaagcaagggaaaggcactgctattcctgatgcctagcgaggaagaaggc
atgaaagtcgcccttcaaaagagggcgatcgacgtgaaacagatcaaaatccgtgccagc
aaaacgcaaactatcgagaaccagctacagaatctcgcatttcaggacccagaaatcaag
tatttgggacagcgggcattcgtatcataccttcggtcaatttatatccacaaggacaag
tcaatattcaaactagaggaacttccggtggataggttcgctgaatctctgggtttacct
ggtacaccgaaaatcaagtttcttaacaaggagattgcgaaaaagaagaaaaacgcgtcg
aggacggtggaagccgctcaggcagaatccagtgaagaggatgaagatgacgaaggggtg
caaaccgctatatcaaaaccgaccgctgtccgaaccaaatacgaccgcatgtttgagagg
aagaatcagaacgttctctcggaacactacagcaagcttatcgaccacgaacccatgtca
gacgatggcgatgacttcattaccctcaaacgggcggatcacggtctggaggacaagact
ccgacctacgatgcaagcgaactctccaaacgaaaactcaaacttggaagggcaaagcgg
accattgcgaaaggcgggctttcaactaagctagttttcgacgatgaaggcaagccacat
gaattgtatgagatggcggatccagatgcctggttcgagggtacgggtggtctggcaggt
gcaaaggaggagggaaagaagttcgcagagggggagaggggtaaaatgaaggtcgcggat
gtggttgataaggaagaggcgagggagaagaaaagggagaagaagcgcaagagaaaggac
aaagagaaagcggtatgtcctttttttttttcgctggacaaatga
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