Laccaria bicolor: LACBIDRAFT_248700
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Entry
LACBIDRAFT_248700 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lbc
Laccaria bicolor
Pathway
lbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LACBIDRAFT_248700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_248700
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LACBIDRAFT_248700
mRNA degradation factors
3'-5' decay
Pan complex
LACBIDRAFT_248700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
6075557
NCBI-ProteinID:
XP_001879730
JGI:
248700
UniProt:
B0D7E6
LinkDB
All DBs
AA seq
410 aa
AA seq
DB search
MLSNLSTTNNPGLKLPEELQGYHTLVPLEPSGTGVERRKFGNWYSTVYRAIRSSDGLPYV
LRRIENFRLTRQSAFAPIEVWSSLRHPGIISVREAFTTRSFDDNSLVVVYAYHPNSQTLF
DAHLKPKPPTYQSRYQHGRQQLLLQAQSTVIAERTIWSYIVQIACAVKKVHDLGQAVRMI
DVSKVLLTGQNRIRISSCGIVDVLMHDTVQDMLTLQQEDLTMFGRLVFALCCNNVSAATS
AHFQKSLELIGRLYSADVKNVALFLISKGGPHRNVDQLLDMIRGKVMQEQEEALNATDRL
EHELQSELENARLVRLLCKFGFINERPEFAREPRWAETGDRYIIKLFRDYVFHQMDEQGN
PVLNMSHVLTCLNKLDAGTDERIMLVARDEQNCLVVSYKEIKACIDGAFT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgaatttgtcaacgacaaacaatccaggcctgaagcttcctgaagaactgcaa
ggttatcataccctagtacctcttgaaccttcagggaccggtgtggagcggagaaaattt
ggtaactggtattcgactgtataccgagccatccggtcctcagatggcttgccgtatgtt
cttcgacgcattgagaatttccgtcttacgcgccagtctgcctttgctccgatcgaggta
tggtcaagcctccgacatccggggatcatttcagtccgggaagcgttcacaacccgttct
ttcgatgataactctctcgttgtcgtgtacgcataccaccccaacagccaaacgctcttc
gacgcccacttgaaaccgaaaccgccgacttatcagtcaaggtaccagcatgggcggcaa
cagctgctgctccaggcacagtctacggtgatcgcggaacgcactatttggtcttacatt
gtccagattgcatgtgctgtcaagaaagtccacgacctaggtcaagctgtcaggatgatt
gatgtctcgaaggttttgctgacaggacaaaatcgcatccgcataagctcatgcgggatc
gtggatgttttgatgcacgacacggttcaggatatgcttactctacagcaggaggacctc
acgatgttcggccgactggtgttcgcactgtgctgtaacaacgtctcagcggctacctcg
gcgcattttcaaaagagcctggagttgattgggcggttatacagcgctgacgtgaaaaat
gttgcactgtttttgattagcaagggtggtccacataggaacgttgaccagttgcttgat
atgatccgtggcaaggttatgcaggaacaagaagaggcgctcaacgcgacggaccgcttg
gagcatgagcttcagagtgagttggaaaatgcgcgtcttgtccggcttttgtgcaaattt
ggctttatcaacgagcgccccgagtttgcacgagagccgcgctgggctgaaactggagac
cgttacattatcaaactgttccgggattacgttttccaccagatggacgagcagggcaac
ccagtattgaatatgtctcatgttctaacatgcttgaacaagctcgacgccgggacggat
gagaggattatgcttgtagctcgcgatgagcagaattgtctggttgtgagctacaaggag
atcaaggcctgcatcgacggggcgttcacgtga
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