Laccaria bicolor: LACBIDRAFT_249203
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Entry
LACBIDRAFT_249203 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_249203
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_249203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_249203
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_249203
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LACBIDRAFT_249203
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LACBIDRAFT_249203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
IBR_1
VWA
Motif
Other DBs
NCBI-GeneID:
6075818
NCBI-ProteinID:
XP_001880350
JGI:
249203
UniProt:
B0D885
LinkDB
All DBs
AA seq
396 aa
AA seq
DB search
QAYTWEASYTRSWDTVQEDEAGSLQSSIEELMARGRRRRYLLAPAAAIRRTIIRHLVLLL
DLSASMMDRDMRPTRFDLMLQYAREFIAEWFDQNPLGQIGVVGMRAGIGERIGEMSGNPQ
DVLKYIAERHKLEPTGEPSLQNAIEMARSSMNHLPTHSSREILIIFGSLTTCDPGNIHDT
IDTCVKNKIRISVVALAAEMKVCRELCNKTGGQFGVAMNEGHFKDLLFELIPPPAQHATS
RVAGAGTGSSNPAADLMMMGFPTRLPDATAPTLCVCHSELKSEGFLCPRCLSKVCDVPTD
CDICGLMIVSSPHLARSYHHLFPVKPYDALPYGDVTDPSSSCHACSRPFPTAVSASATEG
VSPVGRYKCPECHHDFCADCDVFVHDVIHCCPGCGN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
caagcatacacatgggaagcgtcgtatacgcgttcttgggacaccgttcaagaagacgaa
gctggcagtttacaatcttctattgaggagctgatggcaagggggaggcggcgacggtac
ctccttgccccagctgctgccatacgacgtacgattattcgacatctggtgttgctcctc
gacttgtcagcgtcgatgatggacagagacatgagaccgacacgattcgacctcatgctc
caatatgcgcgagagtttatagcggaatggtttgatcagaatcctctggggcagattggc
gtggttggtatgagggctggcattggagaacgaatcggagaaatgtcaggaaatccacaa
gacgtactgaaatatattgctgaacgacacaaacttgagccgactggagaacctagtctc
caaaatgcaattgaaatggccagaagcagtatgaatcaccttccaacccactcatctcgt
gaaatattaatcatatttgggtcgttgaccacatgcgatcccggaaacattcacgataca
attgacacatgtgtaaagaacaaaatccgcatctccgtcgtcgctctggccgcagagatg
aaagtctgccgggagctctgtaacaaaacaggcggtcagtttggggtggctatgaatgaa
ggacacttcaaagatcttttattcgagctcatcccacctcctgcacaacatgcaacgtct
cgtgttgccggggcaggcactggatcttccaatcccgccgccgacctcatgatgatggga
ttccccacccgcctcccggacgcgaccgctccaacgttgtgtgtatgccattccgaactt
aaaagcgaaggcttcctttgcccacgatgtctatccaaagtctgtgatgttcctacggat
tgtgatatctgtggtttgatgattgtgagctctccacatcttgcgagaagctaccaccat
cttttcccggtcaagccttacgatgcccttccttatggcgatgtgaccgatccatcgagc
tcatgtcatgcatgctcgcgtccgttcccaacggcagtctcagcctcagcaactgaaggc
gtaagccctgtgggtcgatataagtgtccagagtgccatcatgatttttgcgcggactgt
gacgtctttgtccacgatgtcattcactgttgtcctggttgcggtaactag
DBGET
integrated database retrieval system
